AAAATTTGTGCGCGCTAAACGACTCACTATTTCCAGAGGATCCGCGGAAT
TCCATTTTAATGATGAGATCTTGGCAGCACATCCTCTTAGTGTGTTAAGT
CACACATCTGCACTGTACTATTCTTCTCAGACAACACGCCTGTAAAGTGA
ATGATGGAGGAGTTGGATCCTCTGCCTGAGCTCTCTCATGCAGTCTGTCC
TCCAGATGAACCCAGAAAGAGACACATATGATGACCATCCATACGCTGAC
CTGTCCCACTGTTCACTCTCTGTTCATAAGCCAAATTGCAGAACAGACCT
CCAACCACCTAGCCCAATGTTTTTTCTCTGCTAAACCAGGTCCATCACCC
TGCCTGCCACCATTATATACCACTGCCTTTCACACCCTTGTTTTTGCATA
TTCTGAAATATTCTACCCCCCCTTACTAGTGCCACCTCGCATTCCTATCC
TCCCTTTCCCTTCCATCTCTTTACCCCCCGACCCCCCCTCCCTGTTCCCC
GAATCCCTTTTTTTTCTTCTCGTTTTCCCCCGTTCCCGCCCTTGCCCCTC
CTCCCATTTCCCTTTTCCCCATTACCTCCTTTACCACCCCCCGTCCCCGT
ATACCTTCCCCCCCCCCTTTCCCCCCCCTCTACTTGTTTTTCCCCTCCTT
TCCCTTTCCCTTTCCCCATTCCCTGTCTCCTTTTCCTTTCCTCTCCCCCC
CCTTTTCCCCCCCTTTTTCCCCCTCTTTTTCCACCCCTCTTCATCCCCTT
TCTTTTCCCCCTCCCCCTTTCCCTTCTCCCTTTT

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAGTTTGAAAGTTGCTTTGGAGGTGGTCA
GAATGAAAAGGAGCTGGGTATGCACAGAGCACAGGTGTGGGTGCTAGAAC
ATCTGCATAGCAGTCCAGTCCTCCGTTCACTGTGACCCAGCACAGGTGTG
GGCGCTAGAACATCTGCATAGCAGCCCGGTCCTCCATTCACTGTGACCCA
GCACAGGTGTGGGTGCTAGAACATCTGCATAGCAGCCCGGTCCTCCATTC
ACTGTGACCCAGCACAGGTGTGGGTGCTAGAACATCTGCATAGCAGTCCA
GTCCTCCGTTCATGGTGACCCAGCACAGGTGTGGGCGCTAGAACATCTGC
ATAGCAGCCCGCCCCTCCATTCACTGTGACCCCGCACAGGCGTGGCCACT
AGAACATCTGCATAGCAGCCCGGTCCTCCATTCACTGTGATCCAGCACAG
GTGTGGATGCTAGAACATCTGCATAGCAGCCCGGTCCTCCATTAACGGTG
ACCCAGCCTCAATTCCTAGAGGCTTAAGTGAGTTCTTCAGTCTGACAGCA
CTGAACAACAGTATTTTCCAACAGATCTCTATCTTCTAGCTGCCAGTATG
TGCCCATTTGATCTCTCCCTTGCACGCTTTCCGCCGCCTGACCTGGTCTC
TTTCTCCCCTCATCACTTTGACCCAC

Query= MSMg01no151_e09.g1 MSMg01no151_e09.g1 CHROMAT_FILE:
MSMg01no151_e09.g1 PHD_FILE: MSMg01no151_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:15:02 2005
         (358 letters)



>mm_chr3_10275970_10276729
          Length = 760

 Score =  466 bits (241), Expect = e-136
 Identities = 334/365 (91%), Gaps = 12/365 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   gtttgaaagttgctttggaggtggtcagaatgaaaaggagctgggtatgcacagagcaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 gtttgaaagttgctttggaggtggtcagaatgaaaaggagctgggtatgcacagagcaca 555

                                                                       
Query: 61  ggtgtgggtgctagaacatctgcatagcagtccagtcctccgttcactg-tgacccagca 119
           |||||||| ||||||||||||||||||||| ||| |||||||| || || ||||||||||
Sbjct: 554 ggtgtgggcgctagaacatctgcatagcagcccaatcctccgtcca-tggtgacccagca 496

                                                                       
Query: 120 caggtgtgggcgctagaacatctgcatagcag-cccggtcctccattcactgtgacccag 178
           ||||||||||| |||||||||||||||||||| ||| ||||||| ||||| |||||||||
Sbjct: 495 caggtgtgggcactagaacatctgcatagcagtcccagtcctccgttcacggtgacccag 436

                                                                       
Query: 179 cacaggtgtgggtgctagaacatctgcatagcagcccg-gtcctccattcactg-tgacc 236
           ||||||||||||  |||||||||||||||||||||||  ||||||| |||| || |||||
Sbjct: 435 cacaggtgtgggcactagaacatctgcatagcagccccagtcctccgttca-tggtgacc 377

                                                                       
Query: 237 cagcacaggtgtgggtgctagaacatctgcatagcagtccagtcctccgttca-tggtga 295
           |||||||||||||||  |||||||||||||||||||| ||||||||||||||| || |||
Sbjct: 376 cagcacaggtgtgggcactagaacatctgcatagcagcccagtcctccgttcactg-tga 318

                                                                       
Query: 296 cccagcacaggtgtgggcgctagaacatctgcatagcagccc-gcccctccattcactg- 353
           ||||||||||||||||  ||||||||| |||||||||||||| | || |||||||| || 
Sbjct: 317 cccagcacaggtgtggatgctagaacaactgcatagcagcccagtcc-tccattca-tgg 260

                
Query: 354 tgacc 358
           |||||
Sbjct: 259 tgacc 255



 Score =  174 bits (90), Expect = 7e-48
 Identities = 117/126 (92%), Gaps = 2/126 (1%)
 Strand = Plus / Minus

                                                                       
Query: 55  agcacaggtgtgggtgctagaacatctgcatagcagtccagtcctccgttcactgtgacc 114
           ||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 375 agcacaggtgtgggcactagaacatctgcatagcagcccagtcctccgttcactgtgacc 316

                                                                       
Query: 115 cagcacaggtgtgggcgctagaacatctgcatagcagcccggtcctccattcactg-tga 173
           ||||||||||||||  ||||||||| |||||||||||||| |||||||||||| || |||
Sbjct: 315 cagcacaggtgtggatgctagaacaactgcatagcagcccagtcctccattca-tggtga 257

                 
Query: 174 cccagc 179
           ||||||
Sbjct: 256 cccagc 251


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 3
Length of query: 358
Length of database: 760
Length adjustment: 9
Effective length of query: 349
Effective length of database: 751
Effective search space:   262099
Effective search space used:   262099
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)