CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCATTTTTCACTGAGTTTTAAGTGCCCCCAACCCCAACCCACCCTTGT
TACTTATCTTCTTTAGGTATGTGGATTGTAGCAAGATTATCCCTTTCTTT
GTTTTCTTTTCTTTCTTTTAAATTTTATTAGGTATTTTCTTTATTTACAT
TTCAAGTGTTATCCTCTTTCCTGGTTTCTCCTCCAAAACCCCCTTATACA
ATCCCCTCTTCCCTTGCTTCTATGAGGGGGTTCCCACACCCACCCACCCA
CTCCCGCTTCCCTAGCCTGGTATTCTCCTACACTAGGGCATCAAGCCTTC
AAAGGACCAAGGGCCTCTCCTCTCAATGATGTACAACAAGGATATCTTCT
GCTACATAAGCAAATGGAGTCATGGGTTCCTCCATGTGTACTCTTTGGTT
GGTGGTTTAGTGGGAACTCAAGGGGGTCTAGTTGATTGACATTGTTGTTT
CTCGTATAGGACTGCAAACCCCTTCAACTCCTTCAGGCCTTTCTCTAACT
CCTCCACTGGGGACCCTGTGTTTGGTCCAATGATTGTCTGTGAGCATCCA
CCTCTGTACCTGTCAGGCACTGGTAGAGCATTTCTGGGGACCGTTATATC
AGGATCCTGTCAGGAAGTATTTCTTGGCATTCATAAAG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAAGATACTGATAAAACACCAGGAATG
TTCTAAGTAGTATGCTCATTGCTAGGTACAAAATAATTGGAAGAATGAGT
TCCAAAAAGGATAAAAATTATTCTGGGACACACTGATGCTCTAGAGTACA
GTCTTAAAAACAGATAGATGAAAAATAGAGATAAGACTGTCAAATAGATA
CGGAGACAGACTGAAAGATACATCCTCGCTGAACCCCACCCCATACACAT
GCCTAAACAGCATTATTTTTTTGTTTGTAATCCTTGTTTCAGGAATGGAT
TTAGCTTCCAGGAATAGCTAGGTACACTTTGCATAGTTTTATTATTTTAA
ATGAATAGAACTGGTATTTTTCTAGAGAGGATATTACTTCACCAAAGTGA
TGTCCTTGCTTTTTTGCCCTGGGCATCACACATTTCAAAAGAGCATGATT
TAATATATCAGAGACTTTCTTTTGAAGAAAATCCCTTAATCCTGCCTTCA
TCTCAGAGGCAGTGAGCTCATTCCAGTAAGCCCCTCCAGAGCGTTCTGCA
GCATAGAGAGTCTCACACTCACAGTGCTTCTCCCTAAACAGTTAAACACT
AGTGACAACTAAGATTCCAAAACTTGATGCAAAATATTAA

Query= MSMg01no154_e15.g1 MSMg01no154_e15.g1 CHROMAT_FILE:
MSMg01no154_e15.g1 PHD_FILE: MSMg01no154_e15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:53 2005
         (617 letters)



>mm_chr3_74729171_74730185
          Length = 1015

 Score = 1129 bits (584), Expect = 0.0
 Identities = 609/618 (98%), Gaps = 4/618 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caagatactgataaaacaccaggaatgttctaagtagtatgctcattgctaggtacaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caagatactgataaaacaccaggaatgttctaagtagtatgctcattgctaggtacaaaa 260

                                                                       
Query: 61  taattggaagaatgagttccaaaaaggataaaaattattctgggacacactgatgctcta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taattggaagaatgagttccaaaaaggataaaaattattctgggacacactgatgctcta 320

                                                                       
Query: 121 gagtacagtcttaaaaacagatagatgaaaaatagagataagactgtcaaatagatacgg 180
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 gagtacagtcttaaaaacagatagatgaaaattagagataagactgtcaaatagatacgg 380

                                                                       
Query: 181 agacagactgaaagatacatcctcgctgaaccccaccccatacacatgcctaaacagcat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agacagactgaaagatacatcctcgctgaaccccaccccatacacatgcctaaacagcat 440

                                                                       
Query: 241 tatttttttgtttgtaatccttgtttcaggaatggatttagcttccaggaatagctaggt 300
           |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct: 441 tatttttttgtttgtaatccttgtttcaggaatggatttagcttccactaatagctaggt 500

                                                                       
Query: 301 acactttgcatagttttattattttaaatgaatagaactggtatttttctagagaggata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acactttgcatagttttattattttaaatgaatagaactggtatttttctagagaggata 560

                                                                       
Query: 361 ttacttcaccaaagtgatgtccttgcttttttgccctgggcatcacacatttcaaaagag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttacttcaccaaagtgatgtccttgcttttttgccctgggcatcacacatttcaaaagag 620

                                                                       
Query: 421 catgatttaatatatcagagactttcttttgaagaaaatcccttaatcctgccttcatct 480
           |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 621 catgatttaatatatcagagcctttcttt-gaagaaaatcccttaatcctgccttcatct 679

                                                                       
Query: 481 cagaggcagtgagctcattccagtaagcccctccagagcgttctgcagcatagagagtct 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cagaggcagtgagctcattccagtaagcccctccagagcgttctgcagcatagagagtct 739

                                                                       
Query: 541 cacactcacagtgcttctccctaaacagttaaa-cactagtgacaactaagattccaaaa 599
           ||||||||||||||||||||||||||||||||| ||||||| ||||||  ||||||||||
Sbjct: 740 cacactcacagtgcttctccctaaacagttaaaacactagtaacaact--gattccaaaa 797

                             
Query: 600 cttgatgcaaaatattaa 617
           ||||||||||||||||||
Sbjct: 798 cttgatgcaaaatattaa 815


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1015
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1005
Effective search space:   610035
Effective search space used:   610035
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)