CTTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCTTCTTTCTCGAGTGGACCTTAAGTCAAGGTAGGCAGCTGGTATTT
GTCTTCAAGATAAAAGAGACACTCTTGCATCATCCACAACATTTTAAATT
AGAATTGTTTCAGTTCTCCAATCTCAAATATCCAACTCACTTACCTAAAA
GGCATGATTTCTTTATTTAGTATCTTATTACATATTTTCTATAGCCATAG
GGAATCACCTAGTTACAATTGATTTTCGTAAAGGATGATGGAAAAGCAAG
AGATCTACAGTACTAATTTTAGTTATTGTATTCTTGAAGTCATGTTTGAA
TTGTCACGTGCTGTGAATGTTAAATTCAGATTATGCTGAGTTTTTGAAAC
TGCTCAAAAGAATATTTTTCTAGACATTCTAATATATAAGCATAAGACCA
GAAAGGTAAATAAAATATATACTTAGGCAAAATATTATTGGACAAAAAAG
AATATGTACAAATACCACTGAGTTTGATTTTATTAACAGTCTACTGTTGA
GTATCTCTTATAAGTGTGGTTTATATACTCAGTGAAAGTCCATTTGAGAA
AACTAAGTTTACATTTCCAAGGGTGTTGTCAGTTAGAGATGACTTTCTGG
TTGGGGATGGGATATTGTGTCCATCCATCACTCTTATTGCTGGGACT

CAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCCTCCTTGGTTTCCGCTCCTCTCTTCT
CTCCCTCCCATTTTCTCCCAGGTTTGCGGTCCCCCTCGCACCCACGAATA
ACTAGGTCCTGCTGGACGGGACACAAAATGAAATGCTGTAAATTGAAAAT
AGTTTGCTGTGTCAATCACATATTAATTATTTTTAGGTTTCCTATGGTAT
TGATAAAGTCATGAGGAGCCAGTGGTAATCAGCATCAATATTCACATACT
ACCTTCTTTACAACTGATTAAACAATGACAGCAACAAGGCTAAAAGATAT
TGGAAGCCTTTTAAAGAAGAAGGTGATTAAGGCTATATTAAAGCTGCAAC
TTAGCTCATCAACAAAATAATTCCAATAGGCATTATTTAGTAGTTGGGAA
AGAAGTTAATTATAATGACAACAGCCTCAGTAAAAGAAACAGTTTATCAA
AGGAATGATAGTTAAAAGTGAAGCAGAATGACACTTTAATTCAACATTTA
CATCTCTAGATTTCACATTATTGACATAGTTCATAAAACTATAAACCAAA
CTTTTTCTCTCCCGTTTCTTATGGGTTTGATGTATTTATATCAATGCTAT
TTTTACTCCTTTTTTGTACTAAATAATCATTTGTAGCATCATTTT

Query= MSMg01no154_g11.b1 MSMg01no154_g11.b1 CHROMAT_FILE:
MSMg01no154_g11.b1 PHD_FILE: MSMg01no154_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:01 2005
         (576 letters)



>mm_chr3_74431756_74432730
          Length = 975

 Score = 1052 bits (544), Expect = 0.0
 Identities = 565/572 (98%), Gaps = 1/572 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttctttctcgagtggaccttaagtcaaggtaggcagctggtatttgtcttcaa 64
           ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattccttctttct-gagtggaccttaagtcaaggtaggcagctggtatttttcttcaa 263

                                                                       
Query: 65  gataaaagagacactcttgcatcatccacaacattttaaattagaattgtttcagttctc 124
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gataaaagagacaatcttgcatcatccacaacattttaaattagaattgtttcagttctc 323

                                                                       
Query: 125 caatctcaaatatccaactcacttacctaaaaggcatgatttctttatttagtatcttat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caatctcaaatatccaactcacttacctaaaaggcatgatttctttatttagtatcttat 383

                                                                       
Query: 185 tacatattttctatagccatagggaatcacctagttacaattgattttcgtaaaggatga 244
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tacatattttccatagccatagggaatcacctagttacaattgattttcgtaaaggatga 443

                                                                       
Query: 245 tggaaaagcaagagatctacagtactaattttagttattgtattcttgaagtcatgtttg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggaaaagcaagagatctacagtactaattttagttattgtattcttgaagtcatgtttg 503

                                                                       
Query: 305 aattgtcacgtgctgtgaatgttaaattcagattatgctgagtttttgaaactgctcaaa 364
           ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 504 aattgtcacatgctgtgaatgttaaattcagattatgctgcgtttttgaaactgctcaaa 563

                                                                       
Query: 365 agaatatttttctagacattctaatatataagcataagaccagaaaggtaaataaaatat 424
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 564 agaatatttttctagacattctaatatataagcataagaccagtaaggtaaataaaatat 623

                                                                       
Query: 425 atacttaggcaaaatattattggacaaaaaagaatatgtacaaataccactgagtttgat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atacttaggcaaaatattattggacaaaaaagaatatgtacaaataccactgagtttgat 683

                                                                       
Query: 485 tttattaacagtctactgttgagtatctcttataagtgtggtttatatactcagtgaaag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tttattaacagtctactgttgagtatctcttataagtgtggtttatatactcagtgaaag 743

                                           
Query: 545 tccatttgagaaaactaagtttacatttccaa 576
           ||||||||||||||||||||||||||||||||
Sbjct: 744 tccatttgagaaaactaagtttacatttccaa 775


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 975
Length adjustment: 10
Effective length of query: 566
Effective length of database: 965
Effective search space:   546190
Effective search space used:   546190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)