Query= MSMg01no155_o23.b1 MSMg01no155_o23.b1 CHROMAT_FILE:
MSMg01no155_o23.b1 PHD_FILE: MSMg01no155_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:56 2005
(457 letters)
>mm_chr3_117457300_117458156
Length = 857
Score = 868 bits (449), Expect = 0.0
Identities = 455/457 (99%)
Strand = Plus / Plus
Query: 1 atcactcagaaggcacttatgtaaagactagcctctggaatctcaaagaagtgggcaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcactcagaaggcacttatgtaaagactagcctctggaatctcaaagaagtgggcaaac 260
Query: 61 acagtgaacaaatgataagattttacacccatttcagacttttggcttctcaataatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagtgaacaaatgataagattttacacccatttcagacttttggcttctcaataatgaa 320
Query: 121 atgatacttgctgtttgattaatagtttccatgtgtgaaccatctctggtcaccagaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgatacttgctgtttgattaatagtttccatgtgtgaaccatctctggtcaccagaaag 380
Query: 181 gagcagtttgcaataacttaagactccaccttcgatgattatttatgaagagaaccatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagcagtttgcaataacttaagactccaccttcgatgattatttatgaagagaaccatca 440
Query: 241 ctttggatgaaaataccttcacgttggattaaaaaactatacaagattcacattcttggt 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cattggatgaaaataccttcacgttggattaaaaaactatacaagattcacattcttggt 500
Query: 301 gactagaaaatgcaaacagaagctaaactgagattctgaactcacaagagacagtgataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gactagaaaatgcaaacagaagctaaactgagattctgaactcacaagagacagtgataa 560
Query: 361 actcaaagcagaggattggaaatggtctagattttaattccagctcaacaaggatttggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actcaaagcagaggattggaaatggtctagattttaattccagctcaacaaggatttggt 620
Query: 421 ttgttccaggttcctgatatttgatttcttttttcaa 457
||||||||||||||||||||||| |||||||||||||
Sbjct: 621 ttgttccaggttcctgatatttgttttcttttttcaa 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_o23.g1 MSMg01no155_o23.g1 CHROMAT_FILE:
MSMg01no155_o23.g1 PHD_FILE: MSMg01no155_o23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:56 2005
(291 letters)
>mm_chr3_117592504_117593194
Length = 691
Score = 460 bits (238), Expect = e-134
Identities = 288/330 (87%), Gaps = 40/330 (12%)
Strand = Plus / Minus
Query: 1 ccatgcttacaagagcaggttcagggacacctgttaagctacccaaagcgcagtattgct 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 591 ccatgcttacaagagcaggttcagggacacc-gttaagctacccaaagcgcagtattgct 533
Query: 61 aa---------------------------------------ttatttcaaccgattcttg 81
|| |||||||||||||||||||
Sbjct: 532 aatgtcaaacaaaaacatcagtatttaatgaagcaaagaggttatttcaaccgattcttg 473
Query: 82 taaagatatgacaggaaatgagggttatagcaataatgggaagagataacttgataggaa 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 taaagatatgacaggaaatgagggttatagcaataatgggaagagataacttgataggaa 413
Query: 142 gaacattcactatgaaagatctgcggcatgtgaatttaagctttaaaataattagtattc 201
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 412 gaacattcactatgaaagatctgcggtatgtgaatttaagctttaaaataattagtattc 353
Query: 202 tacatgagaaacggtctgcaggcagatttgttaatctggggcttaaaaagaaatctcaaa 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 tacatgagaaacggtctgcaggcagatttgttaatctggggcttaaaaagaaatctcaaa 293
Query: 262 gttcacattagtatttgttggcttgtagaa 291
||||| ||||||||||||||||||||||||
Sbjct: 292 gttcagattagtatttgttggcttgtagaa 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
