Query= MSMg01no156_h17.b1 MSMg01no156_h17.b1 CHROMAT_FILE:
MSMg01no156_h17.b1 PHD_FILE: MSMg01no156_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:37 2005
(320 letters)
>mm_chr3_141383537_141384257
Length = 721
Score = 582 bits (301), Expect = e-171
Identities = 313/317 (98%), Gaps = 1/317 (0%)
Strand = Plus / Minus
Query: 5 gaattccttagaaaagaaattggttttactaaatggacaaaaaccaggattgtaccatcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaattccttagaaaagaaattggttttactaaatggacaaaaaccaggattgtaccatcc 462
Query: 65 atcaatttaccccatgttttcaatttcatttcatgca-tttttttatcttcatatgttta 123
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 461 atcaatttaccacatgttttcaatttcatttcatgcattttttttatcttcatatgttta 402
Query: 124 ccacagccacatacatgccaggaagagttttaggcactgagattatgatactaatgtcaa 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 401 ccacagccacatacatgccaggaagagttttaggcactgagattatgaaactaatgtcaa 342
Query: 184 aaagtggatgaactttagaggcttatgttctactagtgaagataatcaacatgaacaaga 243
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 aaagtggatgaactttaggggcttatgttctactagtgaagataatcaacatgaacaaga 282
Query: 244 aagtgataaaggatcaaaatgctatgaatatagatatgtgcttaggagaatgacagggct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aagtgataaaggatcaaaatgctatgaatatagatatgtgcttaggagaatgacagggct 222
Query: 304 ggggtcctgacagaccc 320
|||||||||||||||||
Sbjct: 221 ggggtcctgacagaccc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 721
Length adjustment: 9
Effective length of query: 311
Effective length of database: 712
Effective search space: 221432
Effective search space used: 221432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_h17.g1 MSMg01no156_h17.g1 CHROMAT_FILE:
MSMg01no156_h17.g1 PHD_FILE: MSMg01no156_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:37 2005
(291 letters)
>mm_chr3_141261718_141262408
Length = 691
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 1 acttgattgttctaaattatcttttaaaaaggcaaaggtaatgaggaccgctacacaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgattgttctaaattatcttttaaaaaggcaaaggtaatgaggaccgctacacaact 260
Query: 61 gtggcataatcagaataattagatgttagatcagatctggttgatgagtggcaattctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggcataatcagaataattagatgttagatcagatctggttgatgagtggcaattctgc 320
Query: 121 aaagaggtcttctgtgggaatatgctgggagctggtggcctagagcagccaggctgagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagaggtcttctgtgggaatatgctgggagctggtggcctagagcagccaggctgagga 380
Query: 181 gacagcagggaatttaggtcagtgctctcatctctgcagagaggcccagaaagcagcctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagcagggaatttaggtcagtgctctcatctctgcagagaggcccagaaagcagcctg 440
Query: 241 cttggtttgcagttgtggtgttatgagaggtattaagagcagaacacga 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttggtttgcagttgtggtgttatgagaggtattaagagcagaacacga 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
