Query= MSMg01no156_l07.b1 MSMg01no156_l07.b1 CHROMAT_FILE:
MSMg01no156_l07.b1 PHD_FILE: MSMg01no156_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:54 2005
(316 letters)
>mm_chr3_138058072_138058793
Length = 722
Score = 495 bits (256), Expect = e-144
Identities = 300/318 (94%), Gaps = 6/318 (1%)
Strand = Plus / Plus
Query: 5 gaattcccactcagagactgactgcatgacaacaagtagcctgagatgactgtcattttc 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcccactcagagactgactgcatgacaacaagtagcctgagatgactgtcattttt 264
Query: 65 aaggcagataacttacatgagatcaggttccaccaaattgtcctagaaaacagtgagctt 124
||||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||||||||
Sbjct: 265 aaggcagataacttagatgagataaggttccactaaattttcctagaaaacagtgagctt 324
Query: 125 cttaatttcattaaaatctttcgtgttagatgtgagcttctgagacaagaaaagcatatc 184
|||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| ||
Sbjct: 325 cttaatttcattaagatctttcatgttagatgtgagcttctgaaacaagaaaagcatgtc 384
Query: 185 ctcat------ttaatgggtcattgccaagaaactagagaaaaccagtagggatttttct 238
||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 385 ctcatcttgatttaatgggtcattgccaagaaactggaggaaaccagtagggatatttct 444
Query: 239 gcctgaacatggttcatacaaggagataaaagtgaaaggtagtcacgtcagactctgagg 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcctgaacatggttcatacaaggagataaaagtgaaaggtagtcacgtcagactctgagg 504
Query: 299 agagcttgcctttggtct 316
||||||||||||||||||
Sbjct: 505 agagcttgcctttggtct 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 722
Length adjustment: 9
Effective length of query: 307
Effective length of database: 713
Effective search space: 218891
Effective search space used: 218891
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_l07.g1 MSMg01no156_l07.g1 CHROMAT_FILE:
MSMg01no156_l07.g1 PHD_FILE: MSMg01no156_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:21:54 2005
(278 letters)
>mm_chr3_121792624_121793300
Length = 677
Score = 491 bits (254), Expect = e-143
Identities = 272/278 (97%), Gaps = 1/278 (0%)
Strand = Plus / Plus
Query: 1 ctttcttccttctctccttcactcccttcccctccctccctttgtgtttccctccctccc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 ctttcttccttctctccttcactcccttcccctccctccctttgtgtttccctctctccc 260
Query: 61 ttctttctttccttccttccacaccctaccaactgacctatatcccccagccctaaagga 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 ttctttctttccttccttccacaccctaccaactgacctatataccccagccctaaagga 320
Query: 121 attggtttttttctaagcatcttgtgtttaatacagtagcaatagatgcgtaatgagtgt 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attg-tttttttctaagcatcttgtgtttaatacagtagcaatagatgcgtaatgagtgt 379
Query: 181 cattctcttaaacagttaagaattaagcctctgggttgagatttcgctagactcaattat 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 380 cattctcttaaacagttaagaattaagtctctgggttgagatttcgctagactcaattat 439
Query: 241 ctactgtttgttcttccgtctgcatagctgtgaaatgt 278
||||||||||||| ||||||||||||| ||||||||||
Sbjct: 440 ctactgtttgttcctccgtctgcatagttgtgaaatgt 477
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 278
Length of database: 677
Length adjustment: 9
Effective length of query: 269
Effective length of database: 668
Effective search space: 179692
Effective search space used: 179692
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
