Query= MSMg01no157_h24.b1 MSMg01no157_h24.b1 CHROMAT_FILE:
MSMg01no157_h24.b1 PHD_FILE: MSMg01no157_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:51 2005
(331 letters)
>mm_chr3_18043740_18044470
Length = 731
Score = 617 bits (319), Expect = 0.0
Identities = 325/327 (99%)
Strand = Plus / Plus
Query: 5 gaattcaaaggaaacttcaggtctctattcctgttgatgggtaagttttttctaagttgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaggaaacttcaggtctctattcctgttgatgggtaagttttttctaagttgt 264
Query: 65 ctatcagacttcttgttttcagctctagtggaccattgtcaaccaccaataggcaatatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctatcagacttcttgttttcagctctagtggaccattgtcaaccaccaataggcaatatt 324
Query: 125 tcagaggaactcctgcatgaaggtgcagttttaaggactaggcttataatcagagagagg 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 325 tcagaggaactcctgcatgaaggtgcagttttaaggactagggttataatcagagagagg 384
Query: 185 aacgaaaactgcagtctcttgaatgaacactttctggcctctcaggatctggcatcacag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aacgaaaactgcagtctcttgaatgaacactttctggcctctcaggatctggcatcacag 444
Query: 245 gtatataatactggaatacaccctcttatctgtacttgttgagctaggcagctactctag 304
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtatataatactcgaatacaccctcttatctgtacttgttgagctaggcagctactctag 504
Query: 305 aaatgtaaactcagtgatattctcctt 331
|||||||||||||||||||||||||||
Sbjct: 505 aaatgtaaactcagtgatattctcctt 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_h24.g1 MSMg01no157_h24.g1 CHROMAT_FILE:
MSMg01no157_h24.g1 PHD_FILE: MSMg01no157_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:51 2005
(668 letters)
>mm_chr3_18126507_18127574
Length = 1068
Score = 1243 bits (643), Expect = 0.0
Identities = 665/679 (97%), Gaps = 11/679 (1%)
Strand = Plus / Minus
Query: 1 acacctgtaatttcagcatttttgaaagtgcgggaaggagacctgaagttcaggtcagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 acacctgtaatttcagcatttttgaaagtgcgggaaggagacctgaagttcaggtcagct 646
Query: 61 tgccaacatcccaagatcctgtatggaaaaacaaaacaaacaagtctaataccatatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tgccaacatcccaagatcctgtatggaaaaacaaaacaaacaagtctaataccatatttt 586
Query: 121 aatatatcatatataaattcaatggagcgcttgttataaaaaggaagcagagggtgagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 aatatatcatatataaattcaatggagcgcttgttataaaaaggaagcagagggtgagat 526
Query: 181 atttgactttctcattttacttgctaagaataagccagaaaggcattgtcagcgtgagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atttgactttctcattttacttgctaagaataagccagaaaggcattgtcagcgtgagtg 466
Query: 241 ggaatggggtgctcacctcagaaataaaggggatttgaatacttgcccctctactaactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ggaatggggtgctcacctcagaaataaaggggatttgaatacttgcccctctactaactg 406
Query: 301 gaagtaacgctttcagcaaaatagtttacctccaaagacaggagttatagagaaagatgg 360
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gaagtaaggctttcagcaaaatagtttacctccaaagacaggagttatagagaaagatgg 346
Query: 361 gtgatttcgagaaaatcccatggctccacctatgatggaggcaaacgta----------- 409
| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gcgatttcgagaaaatcccatggctccacctatgatggaggcaaacgtacttctcaagta 286
Query: 410 atactgttctccctgaaagtgggaaatactgaggtaaacacaaaacagaatatgttccag 469
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atactgttctccatgaaagtgggaaatactgaggtaaacacaaaacagaatatgttccag 226
Query: 470 atcagtgtctcaggacttcacaatgaagttaggaagtaaatagaatatccaaagttcaca 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 atcagtgtctcaggacttcacaatgaagttaggaagtaaatagaatatccaaagttcaca 166
Query: 530 cttccctctctatgaattcaaggttgcttattgcctatagtcctcagttttacacacttt 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cttccctctctatgaattcaaggttgcttattgcctatagtcctcagttttacacacttt 106
Query: 590 gtttcattcacacattctactaaggttgctctttgtattgagaggagaattaaaactatt 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 gtttcattcacacattctactaaggttgctctttgtattgagaggagaattaaaactatt 46
Query: 650 ggtgcatgtgactgtagga 668
|||||||||||||||||||
Sbjct: 45 ggtgcatgtgactgtagga 27
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
