Query= MSMg01no157_l16.b1 MSMg01no157_l16.b1 CHROMAT_FILE:
MSMg01no157_l16.b1 PHD_FILE: MSMg01no157_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:07 2005
(319 letters)
>mm_chr3_64873299_64874016
Length = 718
Score = 561 bits (290), Expect = e-164
Identities = 308/314 (98%), Gaps = 3/314 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttcattgttaatatttcttttcatccactccctttttttcatcagtgcttatg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttcattgttaatatttcttttcatccactccctttttttcatcagtgcttatg 263
Query: 64 atctttttttgtgtatgctattaggtgattgtgaatctttcctgggcatgttgctagaag 123
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 atctttttt-gtgtatgctattaggtgattgtgaatctttcctgggcatgctgctagaag 322
Query: 124 taatctagcaagtcagcctattgaaagtaagggtactcaataagtgtcaaacacacatgg 183
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 323 taatctagcaagtcagcctattgaaagtaagggtactcaataagtatcaa-cacacatgg 381
Query: 184 ttcctcttcttattctgtctagaggcaaacatttttgattcgttaagctttttttttttt 243
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttcctcttcttatcctgtctagaggcaaacatttttgattcgttaagctttttttttttt 441
Query: 244 -ctggagtgtctatatttctgtttttaaatgatacatggattcactacctgtagatgttg 302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tctggagtgtctatatttctgtttttaaatgatacatggattcactacctgtagatgttg 501
Query: 303 gctctaatgcttca 316
||||||||||||||
Sbjct: 502 gctctaatgcttca 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 718
Length adjustment: 9
Effective length of query: 310
Effective length of database: 709
Effective search space: 219790
Effective search space used: 219790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_l16.g1 MSMg01no157_l16.g1 CHROMAT_FILE:
MSMg01no157_l16.g1 PHD_FILE: MSMg01no157_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:08 2005
(285 letters)
>mm_chr3_65054996_65055680
Length = 685
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Minus
Query: 1 tatatatctgatattaggtgtttaaaagttccttttctgaggtctgtaggtttcaccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tatatatctgatattaggtgtttaaaagttccttttctgaggtctgtaggtttcaccagg 297
Query: 61 attgtggggatatttctgtgttaagagtttcatatacagttgctatcaaatcacttgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 attgtggggatatttctgtgttaagagtttcatatacagttgctatcaaatcacttgtgg 237
Query: 121 tatgtccattcatctgttgcaaagtatatgaacttagggctggagagatggctcaatggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tatgtccattcatctgttgcaaagtatatgaacttagggctggagagatggctcaatggt 177
Query: 181 taagagcactgactgcttttccagaagtcctgagttcaattctcagcacccatctgatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 176 taagagcactgactgcttttccagaagtcctgagttcaattctcagcacccatttgatgt 117
Query: 241 ctcagaactttctgtaatgggatccaatgccctcttctagtgtgt 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ctcagaactttctgtaatgggatccaatgccctcttctagtgtgt 72
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
