This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Result
BAC
Clone Name
MSMg01-157N18
Chromosome
3 (Build37)
Map Location
76,096,850 - 76,097,150
singlet/doublet
singlet
Overlap gene
Fstl5
Upstream gene
Wdr49
,
Pdcd10
,
Serpini1
,
Golph4
Downstream gene
LOC100041625
,
LOC100041635
Link
Open Mouse BAC browser
Click to get alignment info.
name
Wdr49
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:213248
MGI:3645287
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
name
Pdcd10
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:56426
MGI:1928396
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Serpini1
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:20713
MGI:1194506
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Golph4
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:73124
MGI:1920374
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
Fstl5
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:213262
MGI:2442179
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100041625
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100041625
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
name
LOC100041635
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100041635
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins
pseudo
: _no_value
name
Wdr49
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:94369651
GeneID:213248
MGI:3645287
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
product
: WD repeat domain 49
transcript_id
: XM_143339.5
name
Pdcd10
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:141802138
GeneID:56426
MGI:1928396
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: programmed cell death 10
transcript_id
: NM_019745.3
name
Serpini1
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:6678090
GeneID:20713
MGI:1194506
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: serine (or cysteine) peptidase inhibitor, clade I, member 1
transcript_id
: NM_009250.1
name
Golph4
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:133892733
GeneID:73124
MGI:1920374
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: golgi phosphoprotein 4
transcript_id
: NM_175193.5
name
Fstl5
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:50054053
GeneID:213262
MGI:2442179
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: follistatin-like 5
transcript_id
: NM_178673.3
name
LOC100041625
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149251210
GeneID:100041625
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein
product
: hypothetical protein LOC100041625
transcript_id
: XM_001476712.1
name
Wdr49
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:94369652
GeneID:213248
MGI:3645287
definition
codon_start
: 1
product
: similar to WD repeat domain 49
protein_id
: XP_143339.5
name
Pdcd10
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:31560391
CCDS:CCDS17414.1
GeneID:56426
MGI:1928396
definition
GO_process
: GO:0006915 - apoptosis [Evidence IEA]
codon_start
: 1
note
: TF-1 cell apoptosis related protein-15
product
: programmed cell death 10
protein_id
: NP_062719.2
name
Serpini1
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:6678091
CCDS:CCDS17415.1
GeneID:20713
MGI:1194506
definition
GO_function
: GO:0004866 - endopeptidase inhibitor activity [Evidence IEA]; GO:0004867 - serine-type endopeptidase inhibitor activity [Evidence IEA]
codon_start
: 1
function
: serine protease inhibitor (serpin); inhibits plasminogen activators and plasmin
note
: serine protease inhibitor 17; Neuroserpin; serine (or cysteine) proteinase inhibitor, clade I (neuroserpin), member 1
product
: serine (or cysteine) proteinase inhibitor, clade I, member 1
protein_id
: NP_033276.1
name
Golph4
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:30424814
CCDS:CCDS17416.1
GeneID:73124
MGI:1920374
definition
GO_component
: GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0016021 - integral to membrane [Evidence ISS]
codon_start
: 1
product
: golgi phosphoprotein 4
protein_id
: NP_780402.1
name
Fstl5
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:50054054
GeneID:213262
MGI:2442179
definition
codon_start
: 1
note
: m-D/Bsp120I; ollistatin-like 5
product
: follistatin-like 5
protein_id
: NP_848788.2
name
LOC100041625
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149251211
GeneID:100041625
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001476762.1
name
LOC100041635
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100041635
definition
number
: 1
pseudo
: _no_value
name
LOC100041635
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100041635
definition
number
: 2
pseudo
: _no_value
clone name
MSMg01-151G16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-516H23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-436E02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-316K20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-211C24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-231A06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-348L17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-052I23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-342E22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-320E09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-068J22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-487G22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-323P22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-264O08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-267P05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-194E23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-467A05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-514G11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-481A01
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-520M10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-486G07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-474D18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-543K21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-502N04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-120H03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-058C14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-454B08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-417H09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-510A05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-437H18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-543K21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-363C04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-521G17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-198P09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-423B22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-138G20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-354P17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-421D21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-072D14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-542J04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-117K17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-380A24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-106O05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-318O16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-540D15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-544G22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-260I05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-201C20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-158F15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-434O09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-354F11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-373F15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-096H24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-157N18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-065H03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-277C09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-277C08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-163M02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-133K22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-382A05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-186H04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-413B17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-108B19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-328G05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-094E21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-397A13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-546B16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-085O11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-235F02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-302D02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-072J14
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-442O23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-272P14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-123M12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-289M06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-148J17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-532I04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-547C18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-536E19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-371P17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-345K16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-381B18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-068M21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-329D04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-454O20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181P06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-125L09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-057D19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-430K14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-263N08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-475C15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-428L20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-261J04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-410B07
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-206L05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-532M18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-437O08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-425H20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-279E08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-439P21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-479K01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-448I04
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-536N01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-380O16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-227G07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-112N07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-308L13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-133N09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-063H12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-292H14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-309L19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-146D16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-109C02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-262N02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-019P24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-170B02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-247F09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-186L13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-064I17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-173H15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-166H24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-316K12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-164D22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-129I20
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-139K08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-022K10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-171D07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-094J23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-156H05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-003P24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-071K23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-050D17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-218I17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-128E01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-132C10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-044A20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-133F12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-042H14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-021C24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-311N03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-059M23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-204P05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-197I07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-194I10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-197I14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286O21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-141N16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-038P12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-169G03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-169G11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-239O06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-236D21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-292P05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-252B05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-131K19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-069L11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-260I02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-349F18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-229B12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-066A21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-068M10
singlet/doublet
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plural/unique
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clone name
B6Ng01-211M08
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doublet
plural/unique
unique
clone name
B6Ng01-098C15
singlet/doublet
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plural/unique
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B6Ng01-335J18
singlet/doublet
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plural/unique
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B6Ng01-265E24
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plural/unique
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B6Ng01-241C03
singlet/doublet
doublet
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clone name
B6Ng01-260P12
singlet/doublet
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plural/unique
unique
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B6Ng01-203L15
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-093F15
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doublet
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clone name
B6Ng01-022P18
singlet/doublet
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unique
clone name
B6Ng01-296C05
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doublet
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B6Ng01-157D22
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doublet
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clone name
B6Ng01-172L17
singlet/doublet
doublet
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B6Ng01-210P16
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doublet
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unique
clone name
B6Ng01-032E02
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doublet
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unique
clone name
B6Ng01-190C09
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B6Ng01-005F13
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doublet
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clone name
B6Ng01-260O19
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doublet
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B6Ng01-158C20
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doublet
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clone name
B6Ng01-246E12
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B6Ng01-345N16
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B6Ng01-135B04
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B6Ng01-325E21
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B6Ng01-032F21
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doublet
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B6Ng01-104J14
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B6Ng01-082K09
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B6Ng01-306B20
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B6Ng01-249G07
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B6Ng01-249I10
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B6Ng01-205H18
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doublet
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B6Ng01-130G03
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B6Ng01-083N05
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B6Ng01-116H03
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B6Ng01-142B12
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B6Ng01-060B17
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B6Ng01-015L10
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B6Ng01-316C19
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B6Ng01-108A04
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B6Ng01-101L23
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B6Ng01-092B18
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B6Ng01-174A13
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B6Ng01-028I08
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B6Ng01-195I16
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B6Ng01-065B20
singlet/doublet
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