Query= MSMg01no160_f16.b1 MSMg01no160_f16.b1 CHROMAT_FILE:
MSMg01no160_f16.b1 PHD_FILE: MSMg01no160_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:17 2005
(310 letters)
>mm_chr3_119289165_119289874
Length = 710
Score = 592 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Minus
Query: 5 gaattcacaaacacatcattctggatgttaaaatcatcctgaatgttggatccagcatca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gaattcacaaacacatcattctggatgttaaaatcatcctgaatgttggatccagcatca 451
Query: 65 catcatgctggatgttaaaattttctaattatttgttgaatgtgagcatgaatgttagca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 catcatgctggatgttaaaattttctaattatttgttgaatgtgagcatgaatgttagca 391
Query: 125 tatgattggataatttgttctgtccaatcccagccactggttattgaactaataaaggta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tatgattggataatttgttctgtccaatcccagccactggttattgaactaataaaggta 331
Query: 185 agcttgtaaccaatcagctagtaaatgaatactttgatttccagttagggcatctgtggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agcttgtaaccaatcagctagtaaatgaatactttgatttccagttagggcatctgtggt 271
Query: 245 ccaggccactctactaagttgccttgggactgcgacctttctctacaggattcaaagcag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 ccaggccactctactaagttgccttgggactgcgacctttctctacaggattcaaagcag 211
Query: 305 aatgat 310
||||||
Sbjct: 210 aatgat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no160_f16.g1 MSMg01no160_f16.g1 CHROMAT_FILE:
MSMg01no160_f16.g1 PHD_FILE: MSMg01no160_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:17 2005
(283 letters)
>mm_chr3_119135381_119136062
Length = 682
Score = 524 bits (271), Expect = e-153
Identities = 280/283 (98%), Gaps = 1/283 (0%)
Strand = Plus / Plus
Query: 1 aaaattaatgaaagagaaatgtgtatctttggatattgatcagtgtttttccccatatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaattaatgaaagagaaatgtgtatctttggatattgatcagtgtttttccccatatct 260
Query: 61 taatttttataatcagtaaatagcatcacataaattcatttattccttctttatggcaca 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatttttataatcagtaaatagcatcacataaattcatttattccttctttatggcaca 320
Query: 121 ttttaaaatgaatctatagaaagtaagtgagaaatgacaacctgtggaatatttctatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttaaaatgaatctatagaaagtaagtgagaaatgacaacctgtggaatatttctatga 380
Query: 181 taaatgcaagatatctacaagtgcattttaaaaaatgtgtatgattaaaaaaatcacaaa 240
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 381 taaatgcaagatatctacaagtgcattttaaaaaatgtgtatgatttaaaaa-tcacaaa 439
Query: 241 taaaattttatgatctattttcagtgtcgtctcctgttttatt 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 taaaattttatgatctattttcagtgtcgtctcctgttttatt 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 682
Length adjustment: 9
Effective length of query: 274
Effective length of database: 673
Effective search space: 184402
Effective search space used: 184402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
