NATATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCACCAAGGTAAGGAAGGTTAAGTGAAGGACTTAGGGAAGGAG
CATGTGGGAACATAGACAAAAGACAAAAGCAGTCTGAGTGCCTGGGAGCA
GCATGAACAAAGGATCTTGAGTTGATAAAGCTCTTACTGATTTCAAGAAG
AAACTAGGTGGTCAAGGTGGCTTCAAATATTTTCACAAGGGGGAGAAAGA
TTGCAGAGTGATTCTGCCTAGATTTCGGGGATTTTGACTTTTACTCTAGG
AAAAACAGGGGTATTTAGTGATTCAGGATTCTACTTGCTCTTTGCATCTG
TAGCAGAGGATGTTCTAAACTGGCCTCAGTGGAAGCAGAGCCCCTTGGTC
CTGTAGAGGGTTCATACCCCAGCTTAGGGGAATGCTAGACTGGTGAGGCA
GGAGTGAGTGGGTAGGGGAGCTCCCTCAGAAAAGCAGAGTGGAGAGGGAA
TGGGATAGGCGTTTTTCCCTTTTTCCCCGGCCTTATTTTTCCCCATTCTC
CTTCCTTCCATTACTCCTTATCACCACGTCCCGCTCTTTCTTCTTTTTCC
TTCCTTTTTCCCCCCCACTACTCTTTGTTTATTCATCGCCTTTACATGTT
CTTTAAACCCTTTATTTCACTCCTCCATTATATTCATTATACATTTGTCC
GCTCTTCTACTCTCTCTCACTATAACTTGTATCGCTGTCTCCACCCTCCN

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTGGGAATTGCCAAACCTTGAAAGCCAC
GGGTCCTGCCAGCTGAGACTCAAAAATTGCAACATGAACTGTTTTAAGGG
TTGAAGGTCCTGACACTTGAAGCTTAAGAGAGGGACCATAAAGTGCTAGA
AAAAGAGAGGGTCAGAACACAGGGCTTTGGGGCTATGGCATTAGTTGGTA
CTGATTCTTGCTGACTGCTCTTGTTCCCAAATGTGATGAAGACCAGGATT
TCCCTAGCTTCTGTGTGTCATGTCATTGGCAACCAGAACTCAAAGCAGCA
AGCTTTTTTACTAGTCCCCCNACAGCCCCTTTCTGACTTCTAAGACTATC
AACTATAAGTCCCACAGGCCAAAAAAAAAAAGTGTCTGTGTCTGTCTTCT
TAATACGTAACTTCTGGCGATCAAGGGCCTGTTACTACTCATTAAAAATA
TATGTCTTTGCCTATATATGAATTCCTCCTGATAATAATATTATCTTAAC
CTAGTAATTATAAATATTTTTTGTAACCTCTTATTTTATTTTTTCTATCT
TCCTCACTGTTATATAGATCCATTTATTCTTCGTTATACTCTAGTTTATA
TTAATACTTTTTATTTTAAAACAACTATCATATTAATCTGACTTCTTCAA
TTCCTTCATTCATCGCGTAGCATTANATATAATTCTAATTATTTCAACTT
TTCATTCACAACTTCCTCATTTATCGATTTCATTTTATTAATN

Query= MSMg01no160_l10.b1 MSMg01no160_l10.b1 CHROMAT_FILE:
MSMg01no160_l10.b1 PHD_FILE: MSMg01no160_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:45 2005
         (313 letters)



>mm_chr3_110336962_110337674
          Length = 713

 Score =  584 bits (302), Expect = e-171
 Identities = 308/310 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcaccaaggtaaggaaggttaagtgaaggacttagggaaggagcatgtgggaaca 63
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaccaaggtaaggagggttaagtgaaggacttagggaaggagcatgtgggaaca 263

                                                                       
Query: 64  tagacaaaagacaaaagcagtctgagtgcctgggagcagcatgaacaaaggatcttgagt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagacaaaagacaaaagcagtctgagtgcctgggagcagcatgaacaaaggatcttgagt 323

                                                                       
Query: 124 tgataaagctcttactgatttcaagaagaaactaggtggtcaaggtggcttcaaatattt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgataaagctcttactgatttcaagaagaaactaggtggtcaaggtggcttcaaatattt 383

                                                                       
Query: 184 tcacaagggggagaaagattgcagagtgattctgcctagatttcggggattttgactttt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcacaagggggagaaagattgcagagtgattctgcctagatttcggggattttgactttt 443

                                                                       
Query: 244 actctaggaaaaacaggggtatttagtgattcaggattctacttgctctttgcatctgta 303
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actccaggaaaaacaggggtatttagtgattcaggattctacttgctctttgcatctgta 503

                     
Query: 304 gcagaggatg 313
           ||||||||||
Sbjct: 504 gcagaggatg 513


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space:   214016
Effective search space used:   214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no160_l10.g1 MSMg01no160_l10.g1 CHROMAT_FILE:
MSMg01no160_l10.g1 PHD_FILE: MSMg01no160_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:26:45 2005
         (283 letters)



>mm_chr3_110431905_110432587
          Length = 683

 Score =  493 bits (255), Expect = e-144
 Identities = 276/283 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctgggaattgccaaaccttgaaagccacgggtcctgccagctgagactcaaaaattgcaa 60
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 483 ctgggaattgccaaaccttgaaggccacgggtcctgccagctgagactcaaaaattgcaa 424

                                                                       
Query: 61  catgaactgttttaagggttgaaggtcctgacacttgaagcttaagagagggaccataaa 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 423 catgaactgttttaagggttgaaggtccagacacttgaagcttaagagagggaccataaa 364

                                                                       
Query: 121 gtgctagaaaaagagagggtcagaacacagggctttggggctatggcattagttggtact 180
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 363 gtgctagaaaaagagagggtcagaacacagtgctttggggctatggcattagttggtact 304

                                                                       
Query: 181 gattcttgctgactgctcttgttcccaaatgtgatgaagaccaggatttccctagcttct 240
           |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||
Sbjct: 303 gattcttgctgactgctcttgttcccaaatatgatgatgaccaggatttccctaccttct 244

                                                      
Query: 241 gtgtgtcatgtcattggcaaccagaactcaaagcagcaagctt 283
           |||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 243 gtgtgtcaagtcattggcaaccagaactcaaagcagcaagctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space:   184676
Effective search space used:   184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)