Query= MSMg01no161_l06.b1 MSMg01no161_l06.b1 CHROMAT_FILE:
MSMg01no161_l06.b1 PHD_FILE: MSMg01no161_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:36 2005
(421 letters)
>mm_chr3_51210029_51210848
Length = 820
Score = 754 bits (390), Expect = 0.0
Identities = 402/406 (99%), Gaps = 2/406 (0%)
Strand = Plus / Plus
Query: 15 ggaattcc-cgtggatgctatgcctcctgagcatctgagctctggtcctcaggcttatgt 73
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ggaattccacgtggatgctatgcctcctgagcatctgagctctggtcctcaggcttatgt 273
Query: 74 ggcgttgctttaaccactgagctaactcctcagtctagaagatacgattaattgtaacga 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 ggcgttgctttaaccactgagctaactcctcagtctagaagatacgattaattgtaacga 333
Query: 134 gggatttcactttatcaagaactcctttcaaataattttcagaaataaagcatatacttt 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gggatttcactttatcaagaactcctttcaaataattttcagaaataaagcatatacttt 393
Query: 194 aagtgatatatatatgctttgtgtgacacacgcgtgcacaaacatactcacaaatcttct 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aagtgatatatatatgctttgtgtgacacacgcgtgcacaaacatactcacaaatcttct 453
Query: 254 ctcttaaatcattcatattaggttttacctgagctcctcagtggatgctagctgtagtga 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ctcttaaatcattcatattaggttttacctgagctcctcagtggatgctagctgtagtga 513
Query: 314 caatcataacatggccacgcagaaaaaaaaaatcctgaatccgctgcctctatactgtca 373
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 514 caatcataacatggccacgcag-aaaaaaaaatcctgaatccgctgcctctatacagtca 572
Query: 374 tttgttctacaaatactaaactcctaagatggctgggcattcagga 419
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tttgtcctacaaatactaaactcctaagatggctgggcattcagga 618
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no161_l06.g1 MSMg01no161_l06.g1 CHROMAT_FILE:
MSMg01no161_l06.g1 PHD_FILE: MSMg01no161_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:28:37 2005
(381 letters)
>mm_chr3_51377649_51378429
Length = 781
Score = 696 bits (360), Expect = 0.0
Identities = 375/380 (98%)
Strand = Plus / Minus
Query: 1 cttacaggggtttctcacaaaagctcgtgagttgcctccactccccatgcaaatgtcggc 60
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 580 cttacaggggtttctcacaaaagctcctgagttgcctccactccccatgcaaatgtcggt 521
Query: 61 gttgcgaataattctttcatattcattccagcttctaggattcaatgagtacaaacattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gttgcgaataattctttcatattcattccagcttctaggattcaatgagtacaaacattg 461
Query: 121 gcatcagcctctgcctgctccaggagcttggggctgtaagggaatgttcccttaggcgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gcatcagcctctgcctgctccaggagcttggggctgtaagggaatgttcccttaggcgag 401
Query: 181 ctgagacctgccccaaacagctaggccttgaccaagccccagtcctgcgctgagccccga 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 400 ctgagacctgccccaaacagctaggccttgaccaaaccccagtcctgcgctgagccccga 341
Query: 241 gtcagctgatgctgaggctgaggtggccttctgcttccacccatcccggttcctcagcga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gtcagctgatgctgaggctgaggtggccttctgcttccacccatcccggttcctcagcga 281
Query: 301 cctgctccctctccccacactgcctcaaagtcttccctctcacaacattcaagatactcg 360
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 280 cctgctccctctccccacaccgcctcaaagccttccctctcacaacattcaagatactcg 221
Query: 361 ggcaaatatgtttcttattc 380
||||||||||||||||||||
Sbjct: 220 ggcaaatatgtttcttattc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
