Query= MSMg01no166_b04.b1 MSMg01no166_b04.b1 CHROMAT_FILE:
MSMg01no166_b04.b1 PHD_FILE: MSMg01no166_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:28 2005
(435 letters)
>mm_chr3_153153893_153154727
Length = 835
Score = 781 bits (404), Expect = 0.0
Identities = 425/432 (98%), Gaps = 2/432 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttctcttccctggagtctcacgattggctcccccactacatctacctttctc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gaattcatttctcttccctggagtctcacgattggctcccccactacatctacctttctc 576
Query: 65 tctctctctctcttttcccccttgtgttctaattctgtaaacagtcttagggatatttag 124
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 tctctctctct-ttttcccccttgtgttctaattctgtaaacagtcttagggatatttag 517
Query: 125 aaaagttgggcaaaagttgcagttgtttgccttgcgttcatccctctgtgttgagactag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aaaagttgggcaaaagttgcagttgtttgccttgcgttcatccctctgtgttgagactag 457
Query: 185 aggaggttcttcgtgtcctctgaagtcaccttctgtggaacagagcccataccatttccc 244
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 456 aggaggttctttgtgtcctctgaagtcaccttctgtggaacagagcccataccacttccc 397
Query: 245 tgaatagaagcaagaccag-atgaagcctttccactagggcagggctgatgatatccctc 303
||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 396 tgaatagaagcaagaccaggatgaagcctttccactagggcagggctgatgatgtccctc 337
Query: 304 tgggcagaggaggagctggctttcaagtgagagcttgtgttgtgagtcggtccacacata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tgggcagaggaggagctggctttcaagtgagagcttgtgttgtgagtcggtccacacata 277
Query: 364 gtccccgagaccccacaggctatgcctctgtccacttctccaggcttctctgtctctaaa 423
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtccctgagacctcacaggctatgcctctgtccacttctccaggcttctctgtctctaaa 217
Query: 424 ccttcctgctgc 435
||||||||||||
Sbjct: 216 ccttcctgctgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_b04.g1 MSMg01no166_b04.g1 CHROMAT_FILE:
MSMg01no166_b04.g1 PHD_FILE: MSMg01no166_b04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:28 2005
(338 letters)
>mm_chr3_153048390_153049128
Length = 739
Score = 596 bits (308), Expect = e-175
Identities = 329/336 (97%), Gaps = 1/336 (0%)
Strand = Plus / Plus
Query: 1 tcacagaacacactcacttaggaagccagaaaactgaatgtgactgtgagaacactgagg 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 tcacagaacacactcacttaggaagccagaaaactgattgtgactgtgagaacactgagg 260
Query: 61 catccaagtcttaaggagcagagcaggaaggcctgtctgggaggcagcagagctgctgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catccaagtcttaaggagcagagcaggaaggcctgtctgggaggcagcagagctgctgcc 320
Query: 121 atggcgaggactggctctgcaagcaggctatgagtgaatatcctgggagggaggcctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggcgaggactggctctgcaagcaggctatgagtgaatatcctgggagggaggcctgag 380
Query: 181 agctgggctgaagatgtcaccctccaaaggcaagctcctgccttccacaagggaggctgc 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctgggctgaagatgtcaccttccaaaggcaagctcctgccttccacaagggaggctgc 440
Query: 241 tgctg-ctcatccagactgggtgccatgcagggtgtttcttctacaggggcgcatgaggt 299
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 441 tgctggctcatccagactgggtgccacgcagggtgtttcttctacaggggcgcatgaggg 500
Query: 300 aaaagaaaggaagcaggaaggaatgtccgtgttcta 335
|||||||||||||||||||||||| ||||| |||||
Sbjct: 501 aaaagaaaggaagcaggaaggaatatccgttttcta 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 739
Length adjustment: 9
Effective length of query: 329
Effective length of database: 730
Effective search space: 240170
Effective search space used: 240170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
