Query= MSMg01no166_h14.b1 MSMg01no166_h14.b1 CHROMAT_FILE:
MSMg01no166_h14.b1 PHD_FILE: MSMg01no166_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:59 2005
(363 letters)
>mm_chr3_142710965_142711726
Length = 762
Score = 650 bits (336), Expect = 0.0
Identities = 354/360 (98%), Gaps = 3/360 (0%)
Strand = Plus / Minus
Query: 5 gaattcctgcctgaccctagtatagaggatgactaagagtcagacttctgcaaaaggaaa 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaattcctgcctgaatgtagtatagaggatgactaagagtcagacttctgcaaaaggaaa 503
Query: 65 atgtcgaagcaagagtggagcagggaaagaagtcacagtggaatggaggagacccagaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atgtcgaagcaagagtggagcagggaaagaagtcacagtggaatggaggagacccagaca 443
Query: 125 tcaacctcaaccaactccactggggactcttggaatgggcccaagatggtcacgctgtcc 184
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 442 tcaacctcaaccaactccactggggactcttggaatggg-ccaagatggtcacgctgt-c 385
Query: 185 t-tgcatggcaataatttacctgatcacctaccctgggatacagaaagaagaaactcttc 243
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatgcatggcaataatttacctgatcacctaccctgggatacagaaagaagaaactcttc 325
Query: 244 agggctgtcaacagccgtgtgccctgggtcttccataggcagttctgcccaaacaagggc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agggctgtcaacagccgtgtgccctgggtcttccataggcagttctgcccaaacaagggc 265
Query: 304 caaatgttataagttgcaaacacatgcatttcacctggcaggtttctccctttccactca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caaatgttataagttgcaaacacatgcatttcacctggcaggtttctccctttccactca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 762
Length adjustment: 9
Effective length of query: 354
Effective length of database: 753
Effective search space: 266562
Effective search space used: 266562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_h14.g1 MSMg01no166_h14.g1 CHROMAT_FILE:
MSMg01no166_h14.g1 PHD_FILE: MSMg01no166_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:59 2005
(536 letters)
>mm_chr3_142537855_142538790
Length = 936
Score = 1013 bits (524), Expect = 0.0
Identities = 533/536 (99%)
Strand = Plus / Plus
Query: 1 aatagacaagtttttagggaataaaatgacaaaacacaaactactattacaagcagcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagacaagtttttagggaataaaatgacaaaacacaaactactattacaagcagcaag 260
Query: 61 taagctacaagtaaggataatttcagacataattcttatgcactagtctaggctccttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taagctacaagtaaggataatttcagacataattcttatgcactagtctaggctccttag 320
Query: 121 ggagactgtctcagaaataacttcttactagagaacacggtaagtgtcttttaaacccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggagactgtctcagaaataacttcttactagagaacacggtaagtgtcttttaaacccaa 380
Query: 181 gaactgggtttaagaaggaatttcttagaattataataaaggaaaattggacaaatttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaactgggtttaagaaggaatttcttagaattataataaaggaaaattggacaaatttaa 440
Query: 241 ctttgttaaaaattaataatttttaccatcaaaggacaccacaacaatcagaaaaattgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttgttaaaaattaataatttttaccatcaaaggacaccacaacaatcagaaaaattgc 500
Query: 301 agttaggattctaggtttgcaaatattagtaaattgtgataacgaataacatgttttttg 360
|||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct: 501 agttaggattctaggtttgcaaatattagtaaattgtgataatgaataacatattttttg 560
Query: 361 ttttattcaatattaaatctgaccaactcagaagtaaactgttaagttatgtgagtatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttattcaatattaaatctgaccaactcagaagtaaactgttaagttatgtgagtatgt 620
Query: 421 gaataactgactcaaaattatatacttcaggtatactgtccactaaacataagaattaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaataactgactcaaaattatatacttcaggtatactgtccactaaacataagaattaag 680
Query: 481 tattaaggacaacaaataacagtattaagtaagagaaatggaatgtggaaatgagt 536
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 681 tattaaggacaacaaataacagtattaagtaagagaaatggaatggggaaatgagt 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
