ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAAAGGTAGACATGTCTGGCATGGGAAGGAGTGAACATTACTGAAGGA
GACAAGTGCTATTCACACTCTCTGCAATGGTTTCAAGCTCCACAATTAAA
AAAGGATTTGAAAGATAAAAGTACAGGGCTTTAGGACTAGTACTCAGTGT
GAGCTCATAGCAGCTGTGTCTTAGAACACACTTCTTCCCTTCCTCATCCT
TTTAACTGAGATGCAGCTATTTTCATGCAAGTCAACTTCCCACACTGTGG
ACAGCTGGAAGACAAAGGGCTTAGAACTTCATATACACAGTTTTACTGTG
AAAAATGCTCATTGAATAGACAAGCAAATGAATGACATCAAACAAATTCA
TTATTAAATTCACACCTAATGTTACTAGTGGAATATTATCAAAAAGAGAA
GGAAAGCTATATTAATTACAAGGAAACCTGAGGGGATTATAGTAACACAA
TAATACAATAACAACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAAAGAGAGCGCTCATGCCACATAGAATAGATTTGGGATTTTTAAC
CATGTAGATTCTGGAGATAGAACTCTGGTTTTCCAGCTTGGCTTCTAGTG
TCCTTACCAACAGAACCATCTTGCTGGCTGATTAACGTGCTCATATTTTA
TGTATAAAGAATGCAACAGTTAATGTCCTGTCTGTTTTTGTTTACCATAC
CTTGTTTG

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAA
GCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCA
AAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAA
AATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACT
CCTCCATTGTTGGTGGGAGTGCAGGCTTGTTCAACCACTCTGGAAATCAG
TCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCA
ATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGGA
CACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCT
GGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGG
TACATCTACACAATGGAGTACTACTCCATTAAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAA
GTGGATATTAGCCCCAAACCTAGGATACTCAAGATATAAGATATAATTTG
CTAAACACATGAAACTTCAGAAGAATGAAGACTGAAGTGTGGACACTATG
CCN

Query= MSMg01no166_k17.b1 MSMg01no166_k17.b1 CHROMAT_FILE:
MSMg01no166_k17.b1 PHD_FILE: MSMg01no166_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:14 2005
         (567 letters)



>mm_chr3_62386078_62387043
          Length = 966

 Score =  984 bits (509), Expect = 0.0
 Identities = 552/569 (97%), Gaps = 8/569 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaaggtagacatgtctggcatgggaaggagtgaacattactgaaggagacaagt 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaggtagagatgtctggcatgggaaggagtgaacattactgaaggagacaagt 264

                                                                       
Query: 65  gctattcacactctctgcaatggtttcaagctccacaattaaaaaaggatttgaaagata 124
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctattcacactctctgcaatggtttcaagctccacaattaaaaaaggatttgaaagata 324

                                                                       
Query: 125 aaagtacagggctttaggactagtactcagtgtgagctcatagcagctgtgtcttagaac 184
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagtacagggctttaagactagtactcagtgtgagctcatagcagctgtgtcttagaac 384

                                                                       
Query: 185 acacttcttcccttcctcatccttttaactgagatgcagctattttcatgcaagtcaact 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acacttcttcccttcctcatccttttaactgagatgcagctattttcatgcaagtcaact 444

                                                                       
Query: 245 tcccacactgtggacagctggaagacaaagggcttagaacttcatatacacagttttact 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcccacactgtggacagctggaagacaaagggcttagaacttcatatacacagttttact 504

                                                                       
Query: 305 gtgaaaaatgctcattgaatagacaagcaaatgaatgacatcaaacaaattcattattaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgaaaaatgctcattgaatagacaagcaaatgaatgacatcaaacaaattcattattaa 564

                                                                       
Query: 365 attcacacctaatgttactagtggaatattatcaaaaagagaaggaaagctatattaatt 424
           ||| | |  ||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 565 atttatat-taatgttacaagtggaatattgtcaaaaagagaaggaaagctatattaatt 623

                                                                       
Query: 425 acaaggaaacctgaggggattatagtaacacaataatacaataacaacagagagagagag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acaaggaaacctgaggggattatagtaacacaataatacaataacaacagagagagagag 683

                                                                       
Query: 485 agagagagagagagagagagagagagaga-a-----agagagcgctcatgccacatagaa 538
           ||||||||||||||||||||||||||||| |     |||||| |||||||||||||||||
Sbjct: 684 agagagagagagagagagagagagagagagagagagagagagagctcatgccacatagaa 743

                                        
Query: 539 tagatttgggatttttaaccatgtagatt 567
           ||||||||||||||| |||||||||||||
Sbjct: 744 tagatttgggatttt-aaccatgtagatt 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 22
Number of successful extensions: 22
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 966
Length adjustment: 10
Effective length of query: 557
Effective length of database: 956
Effective search space:   532492
Effective search space used:   532492
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)