Query= MSMg01no166_m21.b1 MSMg01no166_m21.b1 CHROMAT_FILE:
MSMg01no166_m21.b1 PHD_FILE: MSMg01no166_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:24 2005
(476 letters)
>mm_chr3_156432011_156432886
Length = 876
Score = 853 bits (441), Expect = 0.0
Identities = 465/473 (98%)
Strand = Plus / Plus
Query: 4 ggaattctcttttttaccgaatgcataatatctatcttgtatctgatgataaacatttct 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttttttaatgaatgcataatatctatcttgtatctgatgataaacatttct 263
Query: 64 tacatactttggaaataccagtgtcatcagttttagtaaaagctgaataaatattaggcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tacatactttggaaataccagtgtcatcagttttagtaaaagctgaataaatattaggcc 323
Query: 124 ttgcagtcatcagaggattatggatgtgagtgaagctgcagacccgtctgtgccctgcac 183
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 324 ttgcagtcatcagaggattatggatgtgagtgaagctgcagacccatctgtgccctgcac 383
Query: 184 atcatcgttatttctgtttacccacaggacttccttgagcatagactccccttatgggac 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 384 atcatcgttatttctgtttacccacaggacttccttgagcatagactccccttacgggac 443
Query: 244 tgctcagccactgtcttacctgctccacacccgtccggcttgcagagtcacagccccaca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgctcagccactgtcttacctgctccacacccgtccggcttgcagagtcacagccccaca 503
Query: 304 gtcttccttaccatcttgatcacagtgttgagctgtgtcagggaagatgaagcttgccag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtcttccttaccatcttgatcacagtgttgagctgtgtcagggaagatgaagcttgccag 563
Query: 364 tttccccaccccagtgctcagtgtgttcttactgtagatgcaaggtagattaatgctgga 423
|||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttcttctctccagtgctcagtgtgttcttactgtagatgcaaggtagattaatgctgga 623
Query: 424 tcattacagtctggagaatcataattgttcatgttatttcttcccgtgtgaga 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcattacagtctggagaatcataattgttcatgttatttcttcccgtgtgaga 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_m21.g1 MSMg01no166_m21.g1 CHROMAT_FILE:
MSMg01no166_m21.g1 PHD_FILE: MSMg01no166_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:25 2005
(598 letters)
>mm_chr3_156571985_156572982
Length = 998
Score = 1040 bits (538), Expect = 0.0
Identities = 580/596 (97%), Gaps = 4/596 (0%)
Strand = Plus / Minus
Query: 4 atatgagagccattgttttgcgtgataaaatactaattaaaaaagaaaaaataattttta 63
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 801 atatgaaagccattgttttgtgtgataaaatactaattaaaaaagaaaaaataattttta 742
Query: 64 cttatttatttttagcatatgggaaggtcattaatcttatattcacctcttggaatacac 123
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cttatttatttccagcatatgggaaggtcattaatcttatattcacctcttggaatacac 682
Query: 124 ttaggatcttttacatatatattcatggtgtccatgaataaagatcatttaaccttttgc 183
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttaggattttttacatatatattcatggtgtccatgaataaagatcatttaaccttttgc 622
Query: 184 ttaaaaataaaatgaataattcaaatttcagagatttatgtaatcatcaaagtaaaatga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaaaaataaaatgaataattcaaatttcagagatttatgtaatcatcaaagtaaaatga 562
Query: 244 ttgtgatatttcttttagaatattttttaccttaacaaacgattaaagggatcggcactc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttgtgatatttcttttagaatattttttaccttaacaaacgattaaagggatcggcactc 502
Query: 304 agaagacagaagcaggaagatgctgcaaggtcatgacccacgcctagccaagtgatggct 363
|||||||||||||||||||||||||||||||||||| || | ||||||||||||||||
Sbjct: 501 agaagacagaagcaggaagatgctgcaaggtcatgagtcagggttagccaagtgatggct 442
Query: 364 acacaatacgacccatatcagacaaaggagaaacattaggtttccttgcaataggactgg 423
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acacaatatgacccataccagacaaaggagaaacattaggtttccttgcaataggactgg 382
Query: 424 gggctaaggctatctcaaatagtattttaagcatagataaatgcaagattaaaaaccaga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggctaaggctatctcaaatagtattttaagcatagataaatgcaagattaaaaaccaga 322
Query: 484 tgtggagaaagcatatcactgacttgcaaatctatcatctgtc----tgttatctataat 539
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 321 tgtggagaaagcatatcactgacttgcaaatctatcatctgtctatttgttatctataat 262
Query: 540 catccatcatttatctatccatccattcattcacccatccatcttcccacctactg 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catccatcatttatctatccatccattcattcacccatccatcttcccacctactg 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
