Query= MSMg01no168_b21.b1 MSMg01no168_b21.b1 CHROMAT_FILE:
MSMg01no168_b21.b1 PHD_FILE: MSMg01no168_b21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:06 2005
(273 letters)
>mm_chr3_87831836_87832507
Length = 672
Score = 505 bits (261), Expect = e-147
Identities = 267/269 (99%), Gaps = 1/269 (0%)
Strand = Plus / Minus
Query: 5 gaattcagctgccaggatgtggtttttacctaccaagcatctcaccagccttgaaaatgt 64
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 339 gaattcagctgccaggatgtgg-ttttacctaccaagcatctcaccagccttgaaaatgt 281
Query: 65 aaacaaaatccatccatgggtgcagaggaaggaggaactgtgaaatcagatgactctatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aaacaaaatccatccatgggtgcagaggaaggaggaactgtgaaatcagatgactctatt 221
Query: 125 ttagagagattcccatggtgctggagagatggctcaggtgttaagagcacttgctctttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 ttagagagattcccatggtgctggagagatggctcaggtgttaagagcacttgctctttc 161
Query: 185 aaaggacccaggtttcattctcagcacccaagttacagctctcagggtctgtaacttctg 244
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aaaggacccaggtttcattttcagcacccaagttacagctctcagggtctgtaacttctg 101
Query: 245 ttccatggtatctgttgccctcttctggc 273
|||||||||||||||||||||||||||||
Sbjct: 100 ttccatggtatctgttgccctcttctggc 72
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 672
Length adjustment: 9
Effective length of query: 264
Effective length of database: 663
Effective search space: 175032
Effective search space used: 175032
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no168_b21.g1 MSMg01no168_b21.g1 CHROMAT_FILE:
MSMg01no168_b21.g1 PHD_FILE: MSMg01no168_b21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:07 2005
(284 letters)
>mm_chr3_87655225_87655908
Length = 684
Score = 522 bits (270), Expect = e-153
Identities = 279/282 (98%)
Strand = Plus / Plus
Query: 1 cagatagttggttgttagacaaacgggtgaaaagagtttgtttctgtccacagtccccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagatagttggttgttagacaaacgggtgaaaagagtttgtttctgtccacagtccccag 260
Query: 61 gcctcctccacgcctccactccacctctctcacagagagcccagcccacagcacacttct 120
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctcctccatgcctccactccacctctctcacagagagcccagcccacagcacacttct 320
Query: 121 tccccagtctcttccatcctctccgacctaattgctgttctgggatcacctgatgccccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccccagtctcttccatcctctccgacctaattgctgttctgggatcacctgatgccccc 380
Query: 181 accccgccccaacccttcaggcctcctttttttcctgcagacagctgagcctgctggact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accccgccccaacccttcaggcctcctttttttcctgcagacagctgagcctgctggact 440
Query: 241 ttccctattggctgattcagactctggaagcaaaagacagga 282
||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 ttccctaagggctgattcagactctggaagcaaaagacagga 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
