Query= MSMg01no168_c07.b1 MSMg01no168_c07.b1 CHROMAT_FILE:
MSMg01no168_c07.b1 PHD_FILE: MSMg01no168_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:09 2005
(351 letters)
>mm_chr3_52821204_52821953
Length = 750
Score = 536 bits (277), Expect = e-156
Identities = 332/363 (91%), Gaps = 24/363 (6%)
Strand = Plus / Minus
Query: 5 gaattcagataaacgaaatttacctgcaatcagttctgttgaccatgcatgcatgccagc 64
|||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 385 gaattcagataaacgaaatttaattgcaatcagttctgttgatcatgcatgcatgccagc 326
Query: 65 tactggtttcggcatattttacatatactttacattattactttacatattttacattat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tactggtttcggcatattttacatatactttacattattactttacatattttacattat 266
Query: 125 tactttggcttttttttttcaagattcagattcctgaagtctcttttacaacctccaacc 184
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tactttggc-tttttttttcaagattcagattcctgaagtctcttttacaacctccaacc 207
Query: 185 tccaatctcttttctctt---------------ttttttttg-ttgttgttgtttttttt 228
||| |||| | || ||||||||| |||| |||||||||||
Sbjct: 206 -----tcttttttttgttgttgttgttgttgggttttttttgtttgt--ttgtttttttt 154
Query: 229 ttttttttttttttagtttttcgagacaggggtttctctgtatggccctggctgtcctgg 288
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 153 ttttttttttttttagtttttcgagacaggggtttctctgtatagccctggctgtcctgg 94
Query: 289 aactcactttgtagacaacctccaatctcttctgagcgtgtcctcgcctcccaggatttt 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aactcactttgtagacaacctccaatctcttctgagcgtgtcctcgcctcccaggatttt 34
Query: 349 aaa 351
|||
Sbjct: 33 aaa 31
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 750
Length adjustment: 9
Effective length of query: 342
Effective length of database: 741
Effective search space: 253422
Effective search space used: 253422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_c07.g1 MSMg01no168_c07.g1 CHROMAT_FILE:
MSMg01no168_c07.g1 PHD_FILE: MSMg01no168_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:09 2005
(323 letters)
>mm_chr3_52670201_52670923
Length = 723
Score = 545 bits (282), Expect = e-159
Identities = 285/286 (99%)
Strand = Plus / Plus
Query: 38 tcgaagcaacttgtcgtgaaggtgagtccagagcctctgatggaagcacaaggtgtctga 97
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tcgaagcaacttgtcgtgaaggtgagtccagagcctctgatggaagcacaaggtgtctga 297
Query: 98 gctagactgacatgtttgtttcatttcccacagaacagcactattttcagagaagcctac 157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gctagactgacatgtttgtttcatttcccacagaacagcactattttcagagaagcctac 357
Query: 158 aggaagaggacacaaactccttcgaatagatatctgttctccacagaggcccacattagc 217
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 358 aggaagaggacacaaactccttcgaatagatatctgttctccacagaggctcacattagc 417
Query: 218 aatgctgcgtgataaccagaaggactccgttctcactaagctaaagttacctcctgctag 277
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 aatgctgcgtgataaccagaaggactccgttctcactaagctaaagttacctcctgctag 477
Query: 278 aatatagaagccctgtgtgaagacaaaaccgggctggaatttttgc 323
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aatatagaagccctgtgtgaagacaaaaccgggctggaatttttgc 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
