Query= MSMg01no171_j02.b1 MSMg01no171_j02.b1 CHROMAT_FILE:
MSMg01no171_j02.b1 PHD_FILE: MSMg01no171_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:49 2005
(315 letters)
>mm_chr3_130151628_130152342
Length = 715
Score = 551 bits (285), Expect = e-161
Identities = 303/309 (98%)
Strand = Plus / Minus
Query: 5 gaattcctagagctatcctgtctgttcaatgaaccctactgctagcagaaataactattt 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gaattcctagggctatcctgtctgttcaatgaaccctactgctagcagaaataactattt 454
Query: 65 tttaaatgtgtccatattgggacaaaatgatgaacattcctgagctttctcagtatacca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 453 tttaaatgtgtccatattgggacaaaatgatgaacattcctgagctttctcaggatacca 394
Query: 125 ctcttagaagtctaatgcaaggcacaaaacacttaaaagacctctgattagaaaacatag 184
|||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 393 ctcttagaggtctaatgtaaggcacaaaacactgaaaagacctctgattagaaaacatag 334
Query: 185 aagaaaacatttacaaatgataatgagcttgtgggtttctatgccaacttccactaaatc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aagaaaacatttacaaatgataatgagcttgtgggtttctatgccaacttccactaaatc 274
Query: 245 tacagagcattaatataatttttcccaatttatttcctttcattttgttatagtcattcc 304
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 273 tacagagcattaatataatttttcccaatttatttcctttcattatgttatagtcattcc 214
Query: 305 cttgcatcg 313
|||||||||
Sbjct: 213 cttgcatcg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_j02.g1 MSMg01no171_j02.g1 CHROMAT_FILE:
MSMg01no171_j02.g1 PHD_FILE: MSMg01no171_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:49 2005
(288 letters)
>mm_chr3_130081950_130082637
Length = 688
Score = 511 bits (264), Expect = e-149
Identities = 279/284 (98%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1 aaggcaccaagtgagcaagctcgagaggcttgtgggaaagcttcggaaactggtttgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggcaccaagtgagcaagctcgagaggcttgtgggaaagcttcggaaactggtttgtga 260
Query: 61 ctatttgcaaggttaatgcaaagatccgaaggtaaccctgatttagcctgcagaggatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 ctatttgcaaggttaatgcaaagatccgaaggtaaccctgatttagcctgcggaggatga 320
Query: 121 agagggtggatcaagcaggataacccaccatctcctctgtgtacaggcaggtgcttccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agagggtggatcaagcaggataacccaccatctcctctgtgtacaggcaggtgcttccca 380
Query: 181 accaacagccagctgcagctatcagaatcctggtccaggggactgtgcctggagggttat 240
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 381 accaacagccagctgcagctaccagagtcctggtccaggggactgtgcctggagggttat 440
Query: 241 cccat-atatatatacatgcctatatctcctgcaggtctcccta 283
||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccc-tcatatatatacatgcctatatctcctgcaggtctcccta 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
