Query= MSMg01no171_n14.b1 MSMg01no171_n14.b1 CHROMAT_FILE:
MSMg01no171_n14.b1 PHD_FILE: MSMg01no171_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:10 2005
(316 letters)
>mm_chr3_141535496_141536210
Length = 715
Score = 520 bits (269), Expect = e-152
Identities = 302/313 (96%), Gaps = 1/313 (0%)
Strand = Plus / Minus
Query: 4 ggaattccaactgagaaatactgtcaccaatagcctgaacacagaggaaaccacacaaag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 ggaattccaactgagaaatactgtcaccaatagcctgaacacagaggaaaccacacaaag 456
Query: 64 ggtattcactcagattgcttgtggtgaaggtctgtcttacatattgccttcagtactgtg 123
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 agtattcactcagatttcttgtggtgaaggtctgtcttacatattgccttcagtactgtg 396
Query: 124 tgttttacactcccgctgaggtttcagtccgttgagtaaaaagctccaaagaatttgaga 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgttttacactcccgctgaggtttcagtccgttgagtaaaaagctccaaagaatttgagc 336
Query: 184 gtggactgttcagaggcatttttttcttctacagcatcatgcatccatttgaccagagtc 243
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 335 gtggactgttcacaggcatttttt-cttctacagcatcatgcatccatttgaccagagtc 277
Query: 244 aaacacggagttatcactctccttcgtagccagtctttattatgttccagctccgccctt 303
|||||||||||||||| |||||||| ||||||||| || ||||||||||||||||||||
Sbjct: 276 aaacacggagttatcattctccttcctagccagtcactagtatgttccagctccgccctt 217
Query: 304 tgaagttttataa 316
||| |||||||||
Sbjct: 216 tgaggttttataa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 715
Length adjustment: 9
Effective length of query: 307
Effective length of database: 706
Effective search space: 216742
Effective search space used: 216742
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_n14.g1 MSMg01no171_n14.g1 CHROMAT_FILE:
MSMg01no171_n14.g1 PHD_FILE: MSMg01no171_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:10 2005
(276 letters)
>mm_chr3_141390886_141391561
Length = 676
Score = 522 bits (270), Expect = e-153
Identities = 273/274 (99%)
Strand = Plus / Plus
Query: 1 aatagtcaactgcagattaaatcattagagaatttgtcactttacagaattagcctgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagtcaactgcagattaaatcattagagaatttgtcactttacagaattagcctgtca 260
Query: 61 tagttcctaaactttgttgtctgaaattgtttttctctattaaaccctgaaagactgggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagttcctaaactttgttgtctgaaattgtttttctctattaaaccctgaaagactgggc 320
Query: 121 atggttaacaagtgctaagactgttaacatagttagcatagactgttctttaaagcttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atggttaacaagtgctaagactgttaacatagttagcatagactgttctttaaagcttgg 380
Query: 181 aattaaaaggcatttgtcctttgcataggcaatagtattagtcacctgcctgcttaacca 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aattaaaaggcacttgtcctttgcataggcaatagtattagtcacctgcctgcttaacca 440
Query: 241 tgattaggagatctttttgctgacaagttcatac 274
||||||||||||||||||||||||||||||||||
Sbjct: 441 tgattaggagatctttttgctgacaagttcatac 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
