Query= MSMg01no172_d21.b1 MSMg01no172_d21.b1 CHROMAT_FILE:
MSMg01no172_d21.b1 PHD_FILE: MSMg01no172_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:40 2005
(318 letters)
>mm_chr3_150852093_150852810
Length = 718
Score = 547 bits (283), Expect = e-160
Identities = 305/313 (97%), Gaps = 3/313 (0%)
Strand = Plus / Minus
Query: 5 gaattccatttgatcactccagtgaggagcactacagtgaacatggaatcccctagctct 64
||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||
Sbjct: 569 gaattccatttgatcactccagtaaggagcactacagtgaacatggaagcccctagttct 510
Query: 65 gacatattgatatcatgctttaaatatatacccactaatgagacctgctg-aaaaaatat 123
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 509 gacatattgatatcatgctttaaatatatacccactaatgagacctgctgaaaaaaatat 450
Query: 124 tttaggcattataataaagttaacatgtatataaaatggaggcattaaggatttcatagt 183
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 449 tttaggcattataataaagttaacatgtatataaaatggaggcattaaagatttcatagt 390
Query: 184 taataatatcctttaattgtatttattatagtaaaatgttttctattttcaatttgtaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 taataatatcctttaattgtatttattatagtaaaatgttttctattttcaatttgtaca 330
Query: 244 tttattagactgtgagagagagagagagagagacagagagagagacagagagagagagac 303
||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 329 tttattagactgtgagagagagagagaaagagacagagagagaga--gagagagagagac 272
Query: 304 agagagagagaga 316
|||||||||||||
Sbjct: 271 agagagagagaga 259
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no172_d21.g1 MSMg01no172_d21.g1 CHROMAT_FILE:
MSMg01no172_d21.g1 PHD_FILE: MSMg01no172_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:42:40 2005
(249 letters)
>mm_chr3_150707618_150708266
Length = 649
Score = 431 bits (223), Expect = e-125
Identities = 241/249 (96%), Gaps = 4/249 (1%)
Strand = Plus / Plus
Query: 1 tttacctgaatgcttgtcaatagtgtttgtttgtttgtttgtttgtttgtcctcttgctg 60
||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 205 tttacctgaatgcttgtcagtagtgtttgtttgtttgtttgtttgttt----tcttgctg 260
Query: 61 aaaaccattccacaaatggccaatgttgctgaacatttttcttgtattttctagtcattt 120
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 261 aaaaccattccacaaatggctaatgttgctgaacatttttcttgtattttccagtcattt 320
Query: 121 gctcttaagattcattttaatctgttctcatttacttattcaattgtttgctctttgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctcttaagattcattttaatctgttctcatttacttattcaattgtttgctctttgtag 380
Query: 181 ttttattgttgcacatgtgcatacagacttgggcatcattaatacatatagattgatgct 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttttagtgttgcacatgtgcatacagacttgggcatcattaatacatatagattgatgct 440
Query: 241 tacaaggac 249
|||||||||
Sbjct: 441 tacaaggac 449
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
