Query= MSMg01no172_i09.b1 MSMg01no172_i09.b1 CHROMAT_FILE:
MSMg01no172_i09.b1 PHD_FILE: MSMg01no172_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:01 2005
(177 letters)
>mm_chr3_154288239_154288815
Length = 577
Score = 304 bits (157), Expect = 2e-87
Identities = 169/173 (97%)
Strand = Plus / Plus
Query: 4 ggaattccttagagttactgtaattattttgtaagtagataaacaaaacatgaccatggt 63
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttagagttactgtaatgattttgtaagtagataaacaaaacatgaccatggt 263
Query: 64 gacatagaaccaaccatcacagggaacgcggggacacagggcagtcacatagtggtgctt 123
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 264 gacatagaaccaaccatcacagggaactcggggacacggggcagtcacatagtggtgctt 323
Query: 124 gggagttccacctgcacatttaagtcttctaacagtctttgtcagctctttat 176
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 gggagttccacctgcacatttaagtcttctaacggtctttgtcagctctttat 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 177
Length of database: 577
Length adjustment: 8
Effective length of query: 169
Effective length of database: 569
Effective search space: 96161
Effective search space used: 96161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no172_i09.g1 MSMg01no172_i09.g1 CHROMAT_FILE:
MSMg01no172_i09.g1 PHD_FILE: MSMg01no172_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:01 2005
(197 letters)
>mm_chr3_154391162_154391757
Length = 596
Score = 304 bits (157), Expect = 3e-87
Identities = 185/197 (93%), Gaps = 7/197 (3%)
Strand = Plus / Minus
Query: 1 tgtcttttgaggtatctcacagaaatctaaaaatgtcctgtgttcaaacccaaaccccat 60
||||||||||| |||||||||||||||| ||||| ||||||||||||| | |||||||||
Sbjct: 377 tgtcttttgagttatctcacagaaatct-aaaatttcctgtgttcaaaactaaaccccat 319
Query: 61 tcttccacccctccaaactgcatcttctaccactaatcctaaattcttgttgagcgcaca 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 318 tcttccacccctccaaactgcatcttctaccactaatcctaaattcgtgttgagcgcaca 259
Query: 121 cctttctggttgttcagggcaaccctcttttctttagttctgtgtttggttttggttttg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 258 cctttctggttgttcagggcaaccctcttttctttagttctgtgtttggttttggttt-g 200
Query: 181 gttttggtgtgagaagg 197
| |||||||||||
Sbjct: 199 g-----gtgtgagaagg 188
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 596
Length adjustment: 8
Effective length of query: 189
Effective length of database: 588
Effective search space: 111132
Effective search space used: 111132
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
