Query= MSMg01no172_n14.b1 MSMg01no172_n14.b1 CHROMAT_FILE:
MSMg01no172_n14.b1 PHD_FILE: MSMg01no172_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:24 2005
(319 letters)
>mm_chr3_7694173_7694892
Length = 720
Score = 565 bits (292), Expect = e-165
Identities = 310/316 (98%), Gaps = 1/316 (0%)
Strand = Plus / Minus
Query: 5 gaattcactttattcaccgagtctagcaggatgaagaatgtcagttattactggggaagt 64
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gaattcactttatccacagagtctagcaggatgaagaatgtcagttattactggggaagt 461
Query: 65 tcagaaattgtaaacccaagaaaatacagaataaaggaagtagatgatgtataatgtgca 124
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 460 tcagaaattgtaaaccaaagaaaatacagaataaaggaagtagatgatgtacaatgtgca 401
Query: 125 tacttgattttg-ttcaatgttcaatggaaagctgtatgtggatgggtatttgatagctg 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tacttgattttgtttcaatgttcaatggaaagctgtatgtggatgggtatttgatagctg 341
Query: 184 aaaagaaggtaaggaaaggaatatgagaagaaaggaaacggccactggagcagaaggaac 243
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 340 aaaagaaggtaaggaaaggaatatgagaagaaaggaaatggccactggagcagaaggaac 281
Query: 244 agttcagtacaaggtagagatctaaagctatacagctcattattgagaaaagaataacca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 agttcagtacaaggtagagatctaaagctatacagctcattattgagaaaagaataacca 221
Query: 304 gaactgaacattctga 319
||||||||||||||||
Sbjct: 220 gaactgaacattctga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 720
Length adjustment: 9
Effective length of query: 310
Effective length of database: 711
Effective search space: 220410
Effective search space used: 220410
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no172_n14.g1 MSMg01no172_n14.g1 CHROMAT_FILE:
MSMg01no172_n14.g1 PHD_FILE: MSMg01no172_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:24 2005
(291 letters)
>mm_chr3_7525507_7526197
Length = 691
Score = 526 bits (272), Expect = e-154
Identities = 284/288 (98%)
Strand = Plus / Plus
Query: 1 tataaggttttggacttgccatacattttgttcttgggtgctttagactgttccattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 tataaggttttggacttgccatacattttgttcttgggtgctttagactattccattaaa 260
Query: 61 aagtaggattttttttttctgaaatttgaattatgtcaatgaagttttgatttttaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtaggattttttttttctgaaatttgaattatgtcaatgaagttttgatttttaagct 320
Query: 121 acttctgccatttcttggaacctccttttagaaaataagtttcttggtagtctgcttacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acttctgccatttcttggaacctccttttagaaaataagtttcttggtagtctgcttacc 380
Query: 181 tacttcttgattttatttttaaaaagattttataatttaatctgtatctgtttatatttt 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatttcttgattttatttttaaaaagattttataatttaatctgtatctgtttatatttt 440
Query: 241 aatatgtttttactgtttagataccatgacatttatgtctataatgaa 288
||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 441 aatatgtttttactgtttagataccatgaaatttatgtccataatgaa 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
