XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATT
CACCCTTCCGCAAAGAATACCTAGACTGGAAGAGGGCACACCTTGCTCCT
TCTGCTCCCTGAGGACCTGAGTTTCCATGGTTACTTGAAGCAATCCAAAG
TTCTACTGTATTAATTTGACTTTTCCTGGTCTAAAATTTCTTACATTCAA
TCTCAGCTGGAAGAGCATTTGGAAAACAACCACTTTCTTCATAAGCACAG
ACAGGGAGCATGTAAGTCCTACATAGAACTGTATGATTCTGACTCTCTCA
AGCAAATCTTTTATGCTAATAATTTAAATTTATCTCAGATTGCTGTCATT
TTGTTTTAATTCCCTTTATTTTGTTTACTTGAATATGAGCATCCATGAGG
TTAAGCTTAACAAAAGTGGAGGTAGTGGTGGATTCGACAGAGATGTCTAA
GATCTTTAAACACATCAGCAAGAAGACAGCAAGCAGTTCTCTCTGAGGGG
AATGGCCTTCCCCTTGGACTGACTTTACCCTTATAACCCAACACCCTTTC
TTAAGGGACTTTTATCAAGATATTTTTGTCTTTACTAGGATAATAATATT
CTATTTTTACATACTCCCATAAAATACCTTATACCCTTGTTTAAATAATA
CAATTGTTATTTGATCTGTACCTCTTTTAAGAAATCCCTTATTAAACTAT
GTCTCAACACCCAACCTTTTTCTACCTCCCATT

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAACCCCATTTTTAATGGG
GTTGTTTGAATTTCTGGAGTCCAGCTTCTTGAGCTCTTTCTATATATTGG
ATATTAGTCCCCTATCAGATTGAGAATTGGTAAAAATCCTTTTCCGATCT
GTTAGTGGCCCTTTTATCTTATTGACAGTGTTTTTTGCCTTACAGAAGCT
TTGCAATTTTATGAGGTCCCATTTGTCAATTATTGATCTTAGAGCACAAG
CCATTGCTGTTCTGTTTAGAAATTTTTCCCCTGTGCCCATATATTCGAGG
ATTTTTTTTTACCCCTNCCCGACCCCTTTCAGTGTCTCTGGTTGTGTTTT
CCTGTATCCCTTTAAAGACACTACCTCTTTATCAGCGTTCTCCTGTATTT
CTTTAAGTGAGTTATTAAAGGACTTCTTGATGTCCTCTACCTGCATCATG
AGATATGATTTTAAATCTGAGTCTTGTTTTTCGGCTGTGTTGATGTATCC
CGGATCTGTGTGGATGACATTGTAGGTTATCAGACTTCTTTTAGCGTACT
TCTCTTCTCTATACTACCTATTTTATCTCCCTTATGTTCCATTGATCTGT
TTTCCTAAGTTTTTTTTTTTCCGCTGTTTTTCTTTTTTTTATTTTTTATT
CTTTTTTTACTTCTTACTATTTCTATCCTTTATTTTGCGTT

Query= MSMg01no172_n16.b1 MSMg01no172_n16.b1 CHROMAT_FILE:
MSMg01no172_n16.b1 PHD_FILE: MSMg01no172_n16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:43:24 2005
         (487 letters)



>mm_chr3_46217387_46218273
          Length = 887

 Score =  872 bits (451), Expect = 0.0
 Identities = 478/487 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctagactggaagagggcacaccttgctccttctgctccctgaggacctgagtttccatgg 60
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||
Sbjct: 201 ctagactggaagagggcacaccttgctccttctgctccctgaggagttgagtttccatgg 260

                                                                       
Query: 61  ttacttgaagcaatccaaagttctactgtattaatttgacttttcctggtctaaaatttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacttgaagcaatccaaagttctactgtattaatttgacttttcctggtctaaaatttc 320

                                                                       
Query: 121 ttacattcaatctcagctggaagagcatttggaaaacaaccactttcttcataagcacag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacattcaatctcagctggaagagcatttggaaaacaaccactttcttcataagcacag 380

                                                                       
Query: 181 acagggagcatgtaagtcctacatagaactgtatgattctgactctctcaagcaaatctt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagggagcatgtaagtcctacatagaactgtatgattctgactctctcaagcaaatctt 440

                                                                       
Query: 241 ttatgctaataatttaaatttatctcagattgctgtcattttgttttaattccctttatt 300
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttatgcaaataatttaaatttatctcagattgctgtcattttgttttaattccctttatt 500

                                                                       
Query: 301 ttgtttacttgaatatgagcatccatgaggttaagcttaacaaaagtggaggtagtggtg 360
           |||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||
Sbjct: 501 ttgtttacttgaatatgagcattcatgaggttaagcttaagaaaagaggaggtagtggtg 560

                                                                       
Query: 361 gattcgacagagatgtctaagatctttaaacacatcagcaagaagacagcaagcagttct 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 561 gattcgacagagatgtctaagatctttaaacacatcagcaagaagacagcaaacagttct 620

                                                                       
Query: 421 ctctgaggggaatggccttccccttggactgactttacccttataacccaacaccctttc 480
           ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 621 ctctgaggggaatggccttccccttagactgactttgcccttataacccaacaccctttc 680

                  
Query: 481 ttaaggg 487
           |||||||
Sbjct: 681 ttaaggg 687


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space:   418329
Effective search space used:   418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)