Query= MSMg01no174_b09.b1 MSMg01no174_b09.b1 CHROMAT_FILE:
MSMg01no174_b09.b1 PHD_FILE: MSMg01no174_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:52 2005
(321 letters)
>mm_chr3_149260921_149261641
Length = 721
Score = 588 bits (304), Expect = e-172
Identities = 317/322 (98%), Gaps = 4/322 (1%)
Strand = Plus / Minus
Query: 4 ggaattctatcctaagtttgagtttcagtttcaggatgctgatttcaccttagagataat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggaattctatcctaagtttgagtttcagtttcaggatgctgatttcaccttagagataat 334
Query: 64 tctcatcagcaattgagatcattatcaataataaggtgactagtttacactactgttttc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tctcatcagcaattgagatcattatcaataataaggtgactagtttacactactgttttc 274
Query: 124 tatccccgttggtttaaaattcagattgtgaaaagtaaaagcttttccggggacctttaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 tatccccgttggtttaaaattcagattgtgaaaagtaaaagcttttccggggacctttaa 214
Query: 184 aatcctaggaatatatatat-t-tataga--gatagatagatacatacatatatacatgt 239
|||||||||||||||||||| | |||||| |||||||||||||||||||||||||||||
Sbjct: 213 aatcctaggaatatatatatatatatagatagatagatagatacatacatatatacatgt 154
Query: 240 atgtatctatatataatagatataatgacttgtgtagcatttgtgtatcttaagcaatgt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atgtatctatatataatagatataatgacttgtgtagcatttgtgtatcttaagcaatgt 94
Query: 300 tgtgtgtgcagataaggatcag 321
||| ||||||||||||||||||
Sbjct: 93 tgtatgtgcagataaggatcag 72
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_b09.g1 MSMg01no174_b09.g1 CHROMAT_FILE:
MSMg01no174_b09.g1 PHD_FILE: MSMg01no174_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:44:52 2005
(338 letters)
>mm_chr3_149146999_149147732
Length = 734
Score = 543 bits (281), Expect = e-159
Identities = 322/337 (95%), Gaps = 4/337 (1%)
Strand = Plus / Plus
Query: 1 tcttttgggggggaagatgtgaacatcttctgctccctcctgatgaacaccatataacaa 60
|||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 201 tctttt-ggggggaagatgtgaacatcttctgccccctcctgatgaagaccatataacaa 259
Query: 61 accaaagatcattgtggggagctaatgaacctattaggcttacataagagtgagttacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 accaaagatcattgtggggagctaatgaacctattaggcttacataagagtgagttacca 319
Query: 121 gcaggaacatgggtgaccttgaagtagcaccacagaggggtctgcactctgcatcatgac 180
|||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 320 gcaggaacatggatgaccttgaagtagcaccacagagaggtctgcactctgcatcatgac 379
Query: 181 cactccctcatggccacagagatagagatcctttgccctagccttccttagcctaacggc 240
||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||
Sbjct: 380 caccccctcatggccacagagataaagaccctttgccctagccttccttagcctaactgc 439
Query: 241 tctcacatcctccccagaccctgaggccaggctggtaattagagcaaaattgcatacgaa 300
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 440 tctcacatcctccccagaccctgaggccaggggggtaattagagcaaaattgcatacgaa 499
Query: 301 tgcctaggggtgggggtggggagccctgtgaccttcc 337
|||||||||||||||| | ||||||||||||||||
Sbjct: 500 tgcctaggggtggggg---gaagccctgtgaccttcc 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 734
Length adjustment: 9
Effective length of query: 329
Effective length of database: 725
Effective search space: 238525
Effective search space used: 238525
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
