Query= MSMg01no174_k16.b1 MSMg01no174_k16.b1 CHROMAT_FILE:
MSMg01no174_k16.b1 PHD_FILE: MSMg01no174_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:35 2005
(321 letters)
>mm_chr3_39202412_39203132
Length = 721
Score = 605 bits (313), Expect = e-178
Identities = 316/317 (99%)
Strand = Plus / Plus
Query: 5 gaattcacagactccaagagtgtccgagtgtctacacttaaagtagagacactcattgga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacagactccaagagtgtccgagtgtctacacttaaagtagagacactcattgga 264
Query: 65 agagtgaaattctgcaaattgggctgggagcctggagccattcttttgagactgaggaaa 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agagtgaaattctgtaaattgggctgggagcctggagccattcttttgagactgaggaaa 324
Query: 125 tcaagctcctaaattctcctcatttaatttgataaaggaagaggtctcaagaacttcagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcaagctcctaaattctcctcatttaatttgataaaggaagaggtctcaagaacttcagc 384
Query: 185 gacagtcgggccaccactctaccttttatagtactaccccctctacctctgtctgtggga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gacagtcgggccaccactctaccttttatagtactaccccctctacctctgtctgtggga 444
Query: 245 actaattctacactgcctgtcagaacaattaagactaagctcagttaccaagcaggatac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actaattctacactgcctgtcagaacaattaagactaagctcagttaccaagcaggatac 504
Query: 305 aaatgatgtccttgtgg 321
|||||||||||||||||
Sbjct: 505 aaatgatgtccttgtgg 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no174_k16.g1 MSMg01no174_k16.g1 CHROMAT_FILE:
MSMg01no174_k16.g1 PHD_FILE: MSMg01no174_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:35 2005
(289 letters)
>mm_chr3_39351544_39352234
Length = 691
Score = 499 bits (258), Expect = e-146
Identities = 280/288 (97%), Gaps = 2/288 (0%)
Strand = Plus / Minus
Query: 1 tgggcctcttgaaactactaattcatcaggatttcttcttaacgaaagcaaattctttat 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 488 tgggcctcttgaaactactaattcatcaggatttcttcttaacgaaagtaaattctttat 429
Query: 61 ttggtcatagtaaaaagcatgagttacaacattgcattctttgaatttaattttttattc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ttggtcatagtaaaaggcatgagttacaacattgcattctttgaatttaattttttattc 369
Query: 121 tttgaggattgcatacatgaatagagtctttacatcatttccatccactcctcttgcctc 180
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 368 tttgaggattgcatgcatgaatagagtctttacatcatttcaatccactcctcttgcctc 309
Query: 181 tctggttcttcttagtctccaacagctcactaccaaattcatgacgtattccctgctaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tctggttcttcttagtctccaacagctcactaccaaattcatgacgtattccctgctaaa 249
Query: 241 tatgatggttatatacacacacaca--tgtcttttattgttgcttata 286
|||||| |||||| ||||||||||| |||||||||||||||||||||
Sbjct: 248 tatgattgttatacacacacacacacatgtcttttattgttgcttata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 691
Length adjustment: 9
Effective length of query: 280
Effective length of database: 682
Effective search space: 190960
Effective search space used: 190960
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
