CATCAAAATTGCGCCGNAAANGANNNAATCGGACCCGANNGGNGGAANNN
GNGTTCGGGACCNGAGGAGNAANANNNAAANNANNNNNAGNAGAGAAGGG
GAATTAACCCCCCAAACAAAGAAAGGAGNNAGAANAGNNCAGGGCNAGAC
GGCAGAGGGAGAGACAAAAACNCAGGACAGNAGCCNCACCCAAACGAGGG
AACACACAAGGGCCNAGGGAACAGGGGAGNNNACCATTTTTTTGTTAGGG
AACCCCCCTGAGACAGGNNTCTTCACTAGGCCCAAAGGAACAGCAGAANC
TTTTTTCTCTTTTTAACCCCAGAAGGNGGGGCNAACAANAGNANNACACC
CCCCCCCCCNCNAAGAGGAAAAGGGNNGNCAGGACCCAGCCANCAACGGA
CGGAAGACGACACAAAGGAAAGCGCCACCGCAACCCAGCGGAAGGGACCG
CCAGGAAACAGGCAAACCCACAGGAAAAAAAGCAAGACGCACGAAAANAC
AAACGACACCCAGAGNCAACACACACACCCAGGACGCCCCAGACAGCCAA
CCACAAACACAGACGCCAACGACCCCCAGCAACCAGAGACCCACCCCACA
CAGAACCGAGACCCAAAGAAAGGAGAGAGCCCGCGGGAATTTTTTTTTTT
TAGGAGAAGGCACAGAGACAGCCACCGAGGATGCATTATACTTTCGGA

NGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXACTAATCAGTAAAAGGCTGAGGG
AGACTATCAAAACACACAGAATGGGGTGTTGAATATCCCAAGTGATTAAT
CAAGAGCTATTCACTCAAGATACTTATCATTTACTGTGGGATACAGATAT
GCAAAACAAAAGTCAATAATCACTGAATGTGTAGCAGTAAATGTAACGTA
ATGGGAACCATTCCAGAGATTACAGGTGAGAGATTCACTAGTCAGTGGAT
TTGTAAAAGAGGAATTCATATGCAAACAACTCTACACCCTTAAAATTTTG
GATAGATTTTCAAAGACACATGGTGGGGGGGGGGACAGAAAAACTTTGAT
TAGAGAAACATGTTTGCACAATAATACATTACAACAATAGCATGAATCAG
AATAAGTCCTTCCACCACTTACAGGTCCTATTGGTGCTCTGAGCATGGTA
CTAAGAAGCTTGTGCCTATTTCCTCTAAGGAAGAGGATGAAAATTATAAA
GGTAGAGAAAATTCACCTAGCAGTTCCAGATCAGTTCACCAAGGCAGAAA
GATAAGACAGATAACAAGCTTTCTTTTTTTTTTTTTTTTTAAGATTTATT
TATTATATGTAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGA
GTCAGATCTN

Query= MSMg01no177_e21.g1 MSMg01no177_e21.g1 CHROMAT_FILE:
MSMg01no177_e21.g1 PHD_FILE: MSMg01no177_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:49:51 2005
         (600 letters)



>mm_chr3_14125303_14126305
          Length = 1003

 Score =  990 bits (512), Expect = 0.0
 Identities = 546/558 (97%), Gaps = 5/558 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actaatcagtaaaaggctgagggagactatcaaaacacacagaatggggtgttgaatatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actaatcagtaaaaggctgagggagactatcaaaacacacagaatggggtgttgaatatc 260

                                                                       
Query: 61  ccaagtgattaatcaagagctattcactcaagatacttatcatttactgtgggatacaga 120
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 ccaagtgattaatcaagagctattcactcaagatactcatcatttactgtgggatacaga 320

                                                                       
Query: 121 tatgcaaaacaaaagtcaataatcactgaatgtgtagcagtaaatgtaacgtaatgggaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatgcaaaacaaaagtcaataatcactgaatgtgtagcagtaaatgtaacgtaatgggaa 380

                                                                       
Query: 181 ccattccagagattacaggtgagagattcactagtcagtggatttgtaaaagaggaattc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccattccagagattacaggtgagagattcactagtcagtggatttgtaaaagaggaattc 440

                                                                       
Query: 241 atatgcaaacaactctacacccttaaaattttggatagattttcaaagacacat--ggtg 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |
Sbjct: 441 atatgcaaacaactctacacccttaaaattttggatagattttcaaagacacatttgggg 500

                                                                       
Query: 299 gggg-gggggacagaaaaactttgattagagaaacatgtttgcacaataatacattacaa 357
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggggagggggacagaaaaactttgattagagaaacatgtttgcacaataatacattacaa 560

                                                                       
Query: 358 caatagcatgaatcagaataagtccttccaccacttacaggtcctattggtgctctgagc 417
           |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 561 caatagcatgaatcagaataagtccttccaccacttacaggtcccattgatgctctgagc 620

                                                                       
Query: 418 atggtactaagaagcttgtgcctatttcctctaaggaagaggatgaaaattataaaggta 477
           |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 621 atggtactaagaagcttgtgcctagttcctctaaggaagaggatgaaaattacaaagg-a 679

                                                                       
Query: 478 g-agaaaattcacctagcagttccagatcagttcaccaaggcagaaagataagacagata 536
           | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggagaaaattcacttagcagttccagatcagttcaccaaggcagaaagataagacagata 739

                             
Query: 537 acaagctttctttttttt 554
           ||||||||||||||||||
Sbjct: 740 acaagctttctttttttt 757


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1003
Length adjustment: 10
Effective length of query: 590
Effective length of database: 993
Effective search space:   585870
Effective search space used:   585870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)