CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAATAACTATTCCAGAAATGAATATGCCGCCAAGAATTCTAGATTG
AAGATAACTCTAGGCCAAGTCCGAGGAAGATAAGCTACACACATTTAGAT
AAATATTTTCTGTTTTTTGTATTTAGAAAAAACAATAAGCAACTCTTAAA
AACTATACCCTGTTTATTTAGGAAGTTACATTATAGTCTTTAAATTGTGG
CTCAGAGGGAAGCTCAGGGGATTACACACAGTCCCCTATCACTTTGTGCA
TTTTTAAATAGGATCAAGAATTTCAATATTCTTTTTAATTTTTTTTTTTT
TTTGAGACAGTCTCCCTGTTTAGCTCATGCTGGCCTCAAACTGTCAATCT
TCCTGCCTCAGGCTCCCAAGGGGTGACATTACAGGTGTGCAACACTGGCT
CTGCCGGGTGTTAAAGAGATGAATGAGAAACTAAAACTCAACAGATTGAT
CCAGTTAATTATACAGCATCTCTGGAATTTAGACTGTGATGTTCTTTTCT
GGTCCCATCTCTTGGGGTCTGAGTAACCCCTGTGTTTGGGTGTCCATTGC
TTTTTCTAGGGTTGGGAAATTTCGTCTAGAATTTCACTGAATAGCTTATC
CATAACTTCCATCTTGATCTCTTTCCTTCTTTAACTCCATTGATTTTTAG
GTTTGATCTCCTGACTATTTTCCATAGTTCTTGTATATTCTT

ACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAAATTTGTTCCCATGGCAAAATGT
TTTTCAGAGAGATAGATGGAGGTAGAGGGGAAAAAGCTAGAGACAGACAT
GGAGATAGAGATAAACTAAACCTAGAGATAGAAATGATGGAGATAGATAT
CAAAATAGAGGTAGACATGCTGAAAAAGGTAGTTATGGAGATAGAGGAGG
AAAGGAAGGCTTTTTTTTTTTNTTTTTNCCNCTCTCTCTCATCTCCTGCT
CTNTCCCTCCTTCCACCTTTTTTTTTTCCAGGTGTCTGGTTCCAACTGTT
TTGTGTTTTTTTTTTTTTCCCCCAAACAAACCCCCGAAGAAGTGTGGAAG
AGATGAGTGTTTTTTTTCCCCCCCCCAGAAGAAAAAATATGNGGGGGGGG
GGGGTCCTTTATTTATAATCCCACAGCAACATTTCTATATTTTATTTTTT
TCTTTTTGTGTCTCCTTTCATGCGTTATTTTCTGTCTACTATATTCCAAC
GTCTTCAGAGTCTCATTTTTTTCCGATCGCTTTTATATTTCTTTTTCCCT
TCTGATAGATCATACGCCCCCTACAAACCCTCCTGTTTTTGTTTTCTCTC
AAATCTCTTTTTATCATTTTCTTTTTATTTATCTATTTATCCAAATTATA
ATTAATTTTTCTGCGATTTATTTATCTCTCCTCGTCTCATATTATTCTCT
TTCCTTTCCCACCCACCCTCATTTGTACATTTCTGTCTT

Query= MSMg01no178_f17.b1 MSMg01no178_f17.b1 CHROMAT_FILE:
MSMg01no178_f17.b1 PHD_FILE: MSMg01no178_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:08 2005
         (636 letters)



>mm_chr3_157484780_157485815
          Length = 1036

 Score =  890 bits (460), Expect = 0.0
 Identities = 485/496 (97%), Gaps = 5/496 (1%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcaataactattccagaaatgaatatgccgccaagaattctagattgaagataac 63
           ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 496 ggaattcaataactattacagaaatgaatatgctgccaagaattctagattgaagataac 437

                                                                       
Query: 64  tctaggccaagtccgaggaagataagctacacacatttagataaatattttctgtttttt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tctaggccaagtccgaggaagataagctacacacatttagataaatattttctgtttttt 377

                                                                       
Query: 124 gtatttagaaaaaacaataagcaactcttaaaaactataccctgtttatttaggaagtta 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gtatttagaaaaaacaataagcaactcttaaaaactataccctgtttatttaggaagtta 317

                                                                       
Query: 184 cattatagtctttaaattgtggctcagagggaagctcaggggattacacacagtccccta 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 cattatagtctttaaattgtggctcagagggaagctcaggggattacacacagtccccta 257

                                                                       
Query: 244 tcactttgtgcatttttaaataggatcaagaatttcaatattctttttaatttttttttt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 256 tcactttgtgcatttttaaataggatcaagaatttcaatattctttttaatttattattt 197

                                                                       
Query: 304 tttttgagacagtctccctgtttagctcatgctggcctcaaactgtcaatcttcctgcct 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tttttgagacagtctccctgtttagctcatgctggcctcaaactgtcaatcttcctgcct 137

                                                                       
Query: 364 caggctcccaaggggtgacattacaggtgtgcaaca-----ctggctctgccgggtgtta 418
           ||||||| |||| |||||||||||||||||||||||     |||||||||||||||||||
Sbjct: 136 caggctctcaagtggtgacattacaggtgtgcaacatcacactggctctgccgggtgtta 77

                                                                       
Query: 419 aagagatgaatgagaaactaaaactcaacagattgatccagttaattatacagcatctct 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76  aagagatgaatgagaaactaaaactcaacagattgatccagttaattatacagcatctct 17

                           
Query: 479 ggaatttagactgtga 494
           ||||||||||||||||
Sbjct: 16  ggaatttagactgtga 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)