Query= MSMg01no179_i03.b1 MSMg01no179_i03.b1 CHROMAT_FILE:
MSMg01no179_i03.b1 PHD_FILE: MSMg01no179_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:32 2005
(245 letters)
>mm_chr3_73719624_73720267
Length = 644
Score = 360 bits (186), Expect = e-104
Identities = 225/238 (94%), Gaps = 1/238 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaccccagtactcgcatatgttgtatgtgtactcatatacacatatgttattca 64
|||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 441 gaattcaaccccagcac-cgcatatgttgtgtgtgtactcatatacacatatgttattca 383
Query: 65 tttttgtatgtgcctgtatgcataaaatgtacatgtacaatatttatgagctatttctgt 124
||||||| |||||||||| ||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 382 tttttgtgtgtgcctgtacgcataaaatgtacatgtgcaatttttatgagctatttctgt 323
Query: 125 gataaaaataactttgtattatttctatctgtgaaaatatgcaattaccacacgagttaa 184
|||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 322 gataaaaatacctttctattatttctatctgtgaaaatatgcaattaccacatgagttaa 263
Query: 185 tattggtgtacatataacaacatttttaactcaacaagaggaaatgtttaaggaaata 242
| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 262 tgttggtgtgcatataacaacatttttaactcaacaagaggaaatgtttaatgaaata 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 644
Length adjustment: 9
Effective length of query: 236
Effective length of database: 635
Effective search space: 149860
Effective search space used: 149860
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no179_i03.g1 MSMg01no179_i03.g1 CHROMAT_FILE:
MSMg01no179_i03.g1 PHD_FILE: MSMg01no179_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:32 2005
(233 letters)
>mm_chr3_73558913_73559545
Length = 633
Score = 443 bits (229), Expect = e-129
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 1 tcactgcaattttggtaatatactagattgtaaatttcatcaaaatttggcagttttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcactgcaattttggtaatatactagattgtaaatttcatcaaaatttggcagttttcaa 260
Query: 61 attttggtggaaatctccaaatatattactggtgacatttatgaacttatttgtgtatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attttggtggaaatctccaaatatattactggtgacatttatgaacttatttgtgtatga 320
Query: 121 gtcaaacattgcacagatactaacagaaatacaacactcacggatttattagttgtgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcaaacattgcacagatactaacagaaatacaacactcacggatttattagttgtgaat 380
Query: 181 ttatattagtttcctaaaggaggataaaaaattacttgtaattcaatttggaa 233
|||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 ttatattagtttcctaaaggaggataaaaaattacttggaattcaatttggaa 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
