Query= MSMg01no180_f12.b1 MSMg01no180_f12.b1 CHROMAT_FILE:
MSMg01no180_f12.b1 PHD_FILE: MSMg01no180_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:33 2005
(564 letters)
>mm_chr3_131424407_131425370
Length = 964
Score = 1036 bits (536), Expect = 0.0
Identities = 557/564 (98%)
Strand = Plus / Minus
Query: 1 gtagacacattgtaataggaaaaccagatgatttgaaccgggtgctagattatgccctta 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 764 gtagacacattgtaataggaaaaccagatgatttgaaccgggtgctagaacatggcctta 705
Query: 61 ttctactgtttctgtatttattaacagggaagtgtggagtctactgctttgtcctgcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ttctactgtttctgtatttattaacagggaagtgtggagtctactgctttgtcctgcttc 645
Query: 121 ccctactcaaaaccatctaaaagaacactcctatggcttctacttgccatctgtaaagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 ccctactcaaaaccatctaaaagaacactcctatggcttctacttgccatctgtaaagtg 585
Query: 181 attccccttaaatctgtctcaggaattcaaactaattcatcaatacttacacactatgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 attccccttaaatctgtctcaggaattcaaactaattcatcaatacttacacactatgcc 525
Query: 241 ttttgtcacaacaaatgaagcctacagtacaattttatctttatacaaatcctttaactc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ttttgtcacaacaaatgaagcctacagtacaattttatctttatacaaatcctttaactc 465
Query: 301 cacaaacccacattcctttatgtcaatattaaagagtctgttgaccacgccaggaattgc 360
|||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||
Sbjct: 464 cacaaacccacattcctttatgtcaatattaaagagtctgttgatgatgtcaggaattgc 405
Query: 361 tctacagcaataatttatgcgactaacatgaaccatattcccctcacctgcgtagagggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 tctacagcaataatttatgcgactaacatgaaccatattcccctcacctgcgtagagggg 345
Query: 421 actcgaagccttttagacctggcttaaagaggaaagtaccagccttacctacttcagttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 actcgaagccttttagacctggcttaaagaggaaagtaccagccttacctacttcagttt 285
Query: 481 gcactctaccctgttgtggtcacagccatggaaggggagtttactgcttacagtgcataa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gcactctaccctgttgtggtcacagccatggaaggggagtttactgcttacagtgcataa 225
Query: 541 gttgctgcccttaccaaagctaga 564
||||||||||||||||||||||||
Sbjct: 224 gttgctgcccttaccaaagctaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space: 528516
Effective search space used: 528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no180_f12.g1 MSMg01no180_f12.g1 CHROMAT_FILE:
MSMg01no180_f12.g1 PHD_FILE: MSMg01no180_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:53:33 2005
(283 letters)
>mm_chr3_131258213_131258899
Length = 687
Score = 451 bits (233), Expect = e-131
Identities = 271/285 (95%), Gaps = 4/285 (1%)
Strand = Plus / Plus
Query: 1 ctttctgacatcgtttggagtcactggtgttatcgctgcctctccctagtcaccttggag 60
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 ctttctgagatcgtttggagtcactggtgttatctctgcctctccctagtcaccttggag 260
Query: 61 acatgcagctttccccacagatcatttgtgtgtctgtgggctgatgtggtctggtcgaag 120
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacgcagctttctccacagatcatttgtgtgtctgtgggctgatgtggtctggtcgaag 320
Query: 121 gagccttttagttgtagcaacactggttcctttgcaagatcttgctgtgctcaggcaagc 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 gagccttttagttgtagcaacactggctcctttgcaagatcttgctgtgctcaggcaagc 380
Query: 181 agagtcagg--acact--gttgtgtttctgaagagagagggcttgcccctatttgaggaa 236
||||||||| || || |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 agagtcaggtgaccctccgttgtgtttctgaagagacagggcttgcccctatttgaggaa 440
Query: 237 agagcactactccaacagcttcagccatgtgcttgggacatcgca 281
|||| |||||||||||||||||||||||| |||||| ||||||||
Sbjct: 441 agagtactactccaacagcttcagccatgggcttggaacatcgca 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 687
Length adjustment: 9
Effective length of query: 274
Effective length of database: 678
Effective search space: 185772
Effective search space used: 185772
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
