TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCCACAATATGTACTCACTGATAAGTGGATAATAGCCCAGAAACTTAGGA
TACCCAAGATATAAGATACAACTTGCCAAATGCATGAAATTCAAGAAGAA
CGAAGACCAAAGTGTGGACACTTTACCCTTTCTTAGAAATGGGAACAAAA
CACCCATAGAAGGAGTTACAGAGACAAAATTTGGAGCTGTGATGAAAGGA
TGGACCATCTAGTGACTGCCATATGCAGGGATCCATCCCATAATCAGCTT
CCAAATGCTGACACCATTGCATACACTAGCAAGATTTTGCTGAAAGGACC
CAGATATAGTTTTCTCTTGTGACACTATGCCGGGGCCTAGCAAACACAGA
AGTGGATGATCACAGTCAGCTATTGGATGGGTCACACGTTCCCTAATGGA
GGAGCTAGAGAAATTACCCAAGGAGCTAAAGGGAACTGCAACCCTATAGG
TGGAACAACAATATGAACTAACCAGTACCCGGGAGCTCTTGTCTTTAGCT
GCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCC
CATTGGACTTGCAAACTTTATATGCCCCAGTACAGGGGAACTCCAAGGCC
AAAAAGGGGGAGTGGGTGGGGTAGGGGATTGNTTNNNTNNNNNTTTTTCT
TTTTTTTTATTTTTTTTTG

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACAGTCCACTTTGGTAAGACACGTTTTT
AATTTTAATCGTTTCTATGAACTTCCTCGTGTTTCAGTATTTCTATTCTC
CCCTCTCCCATGGCAGCTCCCTCTCTTCCTCTGCACCCTGTTTCTTTTCC
TCCTCTTCCTTGGCCTCAGTCCCTCTCTCCCTCTCTCCTTGTTTTTCATT
CTGTCTTTCCCTCACAGAGCCACGTACACTGAGATGTGAATGAATTAAAT
ATACTTTCTATAAATGAAGAAGTGGAAGTAAAAGCCCAGAGTAAAACCAT
CTCCCTTCTTTAGGAGGCCTTTGAATGAGCAACTTCCAGCCCAGGCTCCT
GCCTGTAAGGATAAGGACCGGATCGAGCATCCTCATTTAGAGCCTTTCAC
ATAACCCAGGCTATCACCATTTCTAACGGAATGAGAGACATGGCACTCTG
AAAAGAGCTTAATGTTTCTTTGAATAAGATGATTAAAAAGAAGATTCACA
TCAATGACTTAATCTGGGCCACTGTTGATGAAGTTCAGAAAGGAGGGTTT
GTTCCAGAGGCCTGTGGAGAGAACGGGAAGAGGACAGAAAATACAGCTTA
GTGCTGCAGCAGCAGAGGACGCTTCCACAGTCACTGGCATCAGCTGCTGG
GTCCTGGCTGGCTGAAG

Query= MSMg01no180_o02.g1 MSMg01no180_o02.g1 CHROMAT_FILE:
MSMg01no180_o02.g1 PHD_FILE: MSMg01no180_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:14 2005
         (625 letters)



>mm_chr3_82464294_82465317
          Length = 1024

 Score = 1093 bits (565), Expect = 0.0
 Identities = 610/625 (97%), Gaps = 1/625 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    acagtccactttggtaagacacgtttttaattttaatcgtttctatgaacttcctcgtgt 60
            ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 1015 acagtccactttggtaagacacgtttttaattttaattgtttctataaatttcctcgtgt 956

                                                                        
Query: 61   ttcagtatttctattctcccctctcccatggcagctccctctcttcctctgcaccctgtt 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  ttcagtatttctattctcccctctcccatggcagctccctctcttcctctgcaccctgtt 896

                                                                        
Query: 121  tcttttcctcctcttccttggcctcagtccctctctccctctctccttgtttttcattct 180
            |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 895  tcttttactcctcttccttgccctcagtccctctctccctctctccttgtttttcattct 836

                                                                        
Query: 181  gtctttccctcacagagccacgtacactgagatgtgaatgaattaaatatactttctata 240
            ||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 835  gtcttcccctcacagagccacatacactgagatgtgaatgagttaaatatactttctata 776

                                                                        
Query: 241  aatgaagaagtggaagtaaaagcccagagtaaaaccatctcccttctttaggaggccttt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775  aatgaagaagtggaagtaaaagcccagagtaaaaccatctcccttctttaggaggccttt 716

                                                                        
Query: 301  gaatgagcaacttccagcccaggctcctgcctgtaaggataaggaccggatcgagcatcc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715  gaatgagcaacttccagcccaggctcctgcctgtaaggataaggaccggatcgagcatcc 656

                                                                        
Query: 361  tcatttagagcctttcacataacccaggctatcaccatttctaacggaatgagagacatg 420
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 655  tcatttagagcctttcacataacccaggctatcaccatttctaacagaatgagagacatg 596

                                                                        
Query: 421  gcactctgaaaagagcttaatgtttctttgaataagatgattaaaaagaagattcacatc 480
            ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595  gca-tctgaaaagagcttaatgtttctttgaataagatgattaaaaagaagattcacatc 537

                                                                        
Query: 481  aatgacttaatctgggccactgttgatgaagttcagaaaggagggtttgttccagaggcc 540
            ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 536  aatgatttaatctgggccactgttgatgaagttcagaaaggaggatttgttccagaggcc 477

                                                                        
Query: 541  tgtggagagaacgggaagaggacagaaaatacagcttagtgctgcagcagcagaggacgc 600
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 476  tgtggagagaacgggaagaggacagaaaatacagcttagtgctgcagcagcaaaggaagc 417

                                     
Query: 601  ttccacagtcactggcatcagctgc 625
            |||||||||||||| ||||||||||
Sbjct: 416  ttccacagtcactgacatcagctgc 392


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1024
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1014
Effective search space:   623610
Effective search space used:   623610
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)