Query= MSMg01no186_a17.b1 MSMg01no186_a17.b1 CHROMAT_FILE:
MSMg01no186_a17.b1 PHD_FILE: MSMg01no186_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:55 2005
(347 letters)
>mm_chr3_72027269_72028016
Length = 748
Score = 586 bits (303), Expect = e-172
Identities = 336/347 (96%), Gaps = 4/347 (1%)
Strand = Plus / Plus
Query: 4 ggaattcaacagaaacacataatattaatttgaaatgcttgtagttgaaccaagatagaa 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaacagaaacacatagtattaatttgaaatgcttgtagttgaaccaagatagaa 263
Query: 64 attgaggtattctcctgtggcatctacagaaattttctcatcattctgttttagaaacac 123
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 264 attgaggtattctcctgtggcatctacagaaattttctcatccttcttttttagaaacac 323
Query: 124 agatgaattttaaactccgtgctctctctactaggttaactaat-ggagcattttggaga 182
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 324 agatgaattttaaactctgtgctctctctactaggttaactaattggagcattttggaga 383
Query: 183 gaaaaaaactctttgggtgtgttttattcagtgttctaatgctctgaaaagacatcctaa 242
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 384 gaaaaaaactctttgggtgtgttttattcagtgttctaatggtctgaaaagacatcctaa 443
Query: 243 ccaagttaactcttatagataaaaaa-catttaatgaggaattgtttacagtttccaaaa 301
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 444 ccaagttaactcttatagataaaaaaacatttaatgaggaattgtttacagtttccaaaa 503
Query: 302 tttagcccattgtcatcatggtgtg-acacagacagaaaaggtgttg 347
||||| ||||||||||||||||| | |||||| ||||||||||||||
Sbjct: 504 tttagtccattgtcatcatggtg-gcacacaggcagaaaaggtgttg 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 748
Length adjustment: 9
Effective length of query: 338
Effective length of database: 739
Effective search space: 249782
Effective search space used: 249782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_a17.g1 MSMg01no186_a17.g1 CHROMAT_FILE:
MSMg01no186_a17.g1 PHD_FILE: MSMg01no186_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:55 2005
(256 letters)
>mm_chr3_71908224_71908880
Length = 657
Score = 458 bits (237), Expect = e-133
Identities = 252/257 (98%), Gaps = 1/257 (0%)
Strand = Plus / Plus
Query: 1 agttg-ttttttttttttccctcagttacaaaaagcctattccagttatggtgggatata 59
||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 agttgttttttttttttttcctctgttacaaaaagcctattccagttatggtgggatata 260
Query: 60 ttcaagatagtattttcattgtgttctctttaatgatggttaatatttatgaaatattat 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 ttcaagatagtattttcattgtgttctctttaatgatggttaatatttatgaaataatat 320
Query: 120 acagtttgaacatgtggaattctctcatggatcttgtgagttcagggatcattttatgac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagtttgaacatgtggaattctctcatggatcttgtgagttcagggatcattttatgac 380
Query: 180 atatgtgtactatatataaacttaatgaacagaagataattgtaattgtatgtttgagaa 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatgtgtactatataaaaacttaatgaacagaagataattgtaattgtatgtttgagaa 440
Query: 240 tttaaaaaatatattag 256
|||||||||||||||||
Sbjct: 441 tttaaaaaatatattag 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 256
Length of database: 657
Length adjustment: 9
Effective length of query: 247
Effective length of database: 648
Effective search space: 160056
Effective search space used: 160056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
