CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATTCAAATGAACTTGTGTAGTTCAAACTACATTGTAAAGTGGAAT
ACGTTGGGGAGACTCCCATAATCTGATTTTAAGAGTAAATCTACAGCAGA
AGTAAGTACAGTAGTGGCTCATGAATAAATCACTGATGTATAATGAATTT
TCCAGAAGCAGACCTACAGGTAGATAGGAAACTGATTTTGAACACAAACC
CAAAGGTGATTCACTTGAGAAAAGGCTGCCTCTTTTAAAATATTTCAGTA
AGAGCAAATTGTTTAAATGCTTCAAAAAAAGGAAGAGAAGAAATGTGACA
TATATCTCATAAATGGTCACCCACTTACATGGTATATTTCTATCTTTCTT
TTTTAAAAATCACGCCCTCAATATGAAGCCATTACTAGCAAAGAGCTTGT
AGGTCAGGATGGCCTTGAACACACAGAGACTTGCTTATCAAATGCTGGGA
TTAAAGGCATGTGCCACCTCACCTGGGACCACTATTTCTTGGCTGTTTTC
AAAAACACATTTCAGAAAAGTCCATAACATTAGATTGATAACAAGCATAG
AAGCGTCACCACTGCAAACTTTGCTGTAAGAGAAAGAAAAACACATCATA
GACTTATTAAAATATTAGGAAATTATGTAATCAGGAAAACTCAGTTTCAG
AATATATAAATAGAAAATTCTCAGTTCCCAACAAATAACCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTAAAATCCATTCTGTTGATCAC
AGATCCCTTACCCCAAGGGAATTACAGGCCTTTCCATTTAAGTGAATCAC
TGACTAGAAAGGTCCTATTTATGACATTTATCTATTTTCTGTGTGCTCTG
TCGTCTTTTGTCTTTAAGTTGAATTGTCTCTTTGTGTTTGTTTTTTTCAG
TGATATTTTGAAATAACTTTCTTTTTTCTTTTTCATAATTCCTGTTATTA
AAATACTATGGGTATTTTCATTATGGTTACCGAGTTATATTTAATAATGC
CACAATCTATCATTCAAGTTTGAATATTTCCAAGTAGGTAAAATTTGATA
ATAGAGAAAACCTCCGCTATTTTTAAAATCTCTATCATTAATGTTTTCAG
TTGCAGATGTCACAGAATTGCATAGTAACACATTTTGAACACAAATTATA
AACTAATAATTATTTTAATTGCATCAGTTCCCTAAGATATGCAGAAAACA
AAAAAGAAGATTCAGATAATGGAAATAACTCTTACGATTTTCTTCACATT
TATGTTAATTAATACATCTGTTTCTATGGATTTGAACTATTGTATGCTAT
CCTAAATTCTGCCCTGCAGGACTTCCTGGATGTATTTTGTAGAGCCTGGT
CATACAGATAAATTTCCTTAGTCTTTGTTTATCTGTCTAA

Query= MSMg01no187_o13.g1 MSMg01no187_o13.g1 CHROMAT_FILE:
MSMg01no187_o13.g1 PHD_FILE: MSMg01no187_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:22 2005
         (597 letters)



>mm_chr3_149540881_149541877
          Length = 997

 Score = 1139 bits (589), Expect = 0.0
 Identities = 595/597 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttaaaatccattctgttgatcacagatcccttaccccaagggaattacaggcctttcca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttaaaatccattctgttgatcacagatcccttaccccaagggaattacaggcctttcca 260

                                                                       
Query: 61  tttaagtgaatcactgactagaaaggtcctatttatgacatttatctattttctgtgtgc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaagtgaatcactgactagaaaggtcctatttatgacatttatctattttctgtgtgc 320

                                                                       
Query: 121 tctgtcgtcttttgtctttaagttgaattgtctctttgtgtttgtttttttcagtgatat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgtcgtcttttgtctttaagttgaattgtctctttgtgtttgtttttttcagtgatat 380

                                                                       
Query: 181 tttgaaataactttcttttttctttttcataattcctgttattaaaatactatgggtatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgaaataactttcttttttctttttcataattcctgttattaaaatactatgggtatt 440

                                                                       
Query: 241 ttcattatggttaccgagttatatttaataatgccacaatctatcattcaagtttgaata 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcattatggttaccgagttatatttaataatgccacaatctatcattcaagtttgaata 500

                                                                       
Query: 301 tttccaagtaggtaaaatttgataatagagaaaacctccgctatttttaaaatctctatc 360
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 501 tttccaagtaggtaaaatttgataatagagaaaacctccgttatttttaaaatctctatc 560

                                                                       
Query: 361 attaatgttttcagttgcagatgtcacagaattgcatagtaacacattttgaacacaaat 420
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 attaatgttttcagttgcagatgtcagagaattgcatagtaacacattttgaacacaaat 620

                                                                       
Query: 421 tataaactaataattattttaattgcatcagttccctaagatatgcagaaaacaaaaaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tataaactaataattattttaattgcatcagttccctaagatatgcagaaaacaaaaaag 680

                                                                       
Query: 481 aagattcagataatggaaataactcttacgattttcttcacatttatgttaattaataca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagattcagataatggaaataactcttacgattttcttcacatttatgttaattaataca 740

                                                                    
Query: 541 tctgtttctatggatttgaactattgtatgctatcctaaattctgccctgcaggact 597
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tctgtttctatggatttgaactattgtatgctatcctaaattctgccctgcaggact 797


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space:   579369
Effective search space used:   579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)