Query= MSMg01no188_e23.b1 MSMg01no188_e23.b1 CHROMAT_FILE:
MSMg01no188_e23.b1 PHD_FILE: MSMg01no188_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:55 2005
(311 letters)
>mm_chr3_127172062_127172772
Length = 711
Score = 551 bits (285), Expect = e-161
Identities = 305/319 (95%), Gaps = 12/319 (3%)
Strand = Plus / Minus
Query: 5 gaattcttaccacccacctgctgcttttatatgtgtttagttgtcagtgtttgtagtcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 gaattcttaccacccacctgctgcttttatatgtgtttagttgtcagtgtttgtagtcag 585
Query: 65 ggctctgctttgatgaaaagaaaaaaacaaaaaacaaaaacaaaac------------aa 112
|||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 584 ggctctgctttgatgaaaagaaaaaaacaaaaaacaaaaacaaaacaaaacaaaacaaaa 525
Query: 113 aacaaaagcaaaacccagagacaaacagctattatcaaagagtaaaaccattattctctt 172
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 524 aacaaaagcaaaacccagagacaaacagctattatcaaagggtaaaaccattattctctt 465
Query: 173 aagggttcttattacatgtgacaaagactttctccctagcaaccaccatttgtcatgtgg 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 aagggttcttattacatgtgacaaagactttctccctagcaaccaccatttgtcatgtgg 405
Query: 233 ctctgtatctagagactgggctctgccttactcagcctgtcaaactgcagggaacgatta 292
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 404 ctctgtatctagagactgggttctgccttactcagcctgtcaaactgcagggaacgatta 345
Query: 293 cactctccttctgtgagtg 311
|||||||||||||||||||
Sbjct: 344 cactctccttctgtgagtg 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no188_e23.g1 MSMg01no188_e23.g1 CHROMAT_FILE:
MSMg01no188_e23.g1 PHD_FILE: MSMg01no188_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:55 2005
(281 letters)
>mm_chr3_127096519_127097201
Length = 683
Score = 497 bits (257), Expect = e-145
Identities = 277/285 (97%), Gaps = 4/285 (1%)
Strand = Plus / Plus
Query: 1 tcattacttgtcttcatgcttacatgtattaaagcctaaaatctgtggggcgaatttttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattacttgtcttcatgcttacatgtattaaagcctaaaatctgtggggcgaatttttg 260
Query: 61 caatgtttatggtatttattacagaa---cttttttttttttt-ttttggtttttcgaga 116
|||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||
Sbjct: 261 caatgtttatggtatttattacagaacatctttttttttttttcttttggtttttcaaga 320
Query: 117 cagggtttctctgtatagccctggctgtcctggagctcactttgtagcccaggctggcct 176
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 cagggtttctctgtatagccctggctgtcctggagctcactttgtagaccaggctggcct 380
Query: 177 cgaactcagaaatccgcctgcctctgcctcccgagtgctgggattaaaggtgtgcgccac 236
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 381 cgaactcagaaatccgcctgcctctgcctcctgagtgctgggattaaaggcgtgcgccac 440
Query: 237 cacgcccagccagaacatcttttgaggtaagactatctcctaatc 281
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacgcccagccagaacatcttttgaggtaagactatctcctaatc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 683
Length adjustment: 9
Effective length of query: 272
Effective length of database: 674
Effective search space: 183328
Effective search space used: 183328
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
