Query= MSMg01no188_j08.b1 MSMg01no188_j08.b1 CHROMAT_FILE:
MSMg01no188_j08.b1 PHD_FILE: MSMg01no188_j08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:16 2005
(322 letters)
>mm_chr3_63210558_63211279
Length = 722
Score = 613 bits (317), Expect = e-180
Identities = 317/317 (100%)
Strand = Plus / Minus
Query: 5 gaattcagaagtccacctgcctctgcctcccaagtgctgggattaaaggcatgagccacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 gaattcagaagtccacctgcctctgcctcccaagtgctgggattaaaggcatgagccacc 531
Query: 65 actccgggcaaaccacttgcatcttaaatagtttgtgtatcaagacttgtttaaggagtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 actccgggcaaaccacttgcatcttaaatagtttgtgtatcaagacttgtttaaggagtc 471
Query: 125 ttgttttattgggccaatgaattcttaacgatgatgtcacaaagtgctgaattccagccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttgttttattgggccaatgaattcttaacgatgatgtcacaaagtgctgaattccagccc 411
Query: 185 tataccatgcaagacatctttgggctacttgatgtcagaactgcaaactctatgttatct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tataccatgcaagacatctttgggctacttgatgtcagaactgcaaactctatgttatct 351
Query: 245 tgttccctcccccttttgagagtgctgacactgttgagttcatgttcagtgggggaacaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgttccctcccccttttgagagtgctgacactgttgagttcatgttcagtgggggaacaa 291
Query: 305 gaagggaaagttctgtg 321
|||||||||||||||||
Sbjct: 290 gaagggaaagttctgtg 274
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no188_j08.g1 MSMg01no188_j08.g1 CHROMAT_FILE:
MSMg01no188_j08.g1 PHD_FILE: MSMg01no188_j08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:04:16 2005
(191 letters)
>mm_chr3_63118127_63118716
Length = 590
Score = 354 bits (183), Expect = e-102
Identities = 189/191 (98%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 1 ctgaaggaagaacctttgcaaggcttttctgtgttgatctttgtgttgtttgtcctacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgaaggaagaacctttgcaaggcttttctgtgttgatctttgtgttgtttgtcctacaa 260
Query: 61 ccagagtgtgtgggccatggacttgtcagaggaagttatatccctaggtgcctttcattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccagagtgtgtgggccatggacttgtcagaggaagttatatccctaggtgcctttcattc 320
Query: 121 cctcgttcccagatgcagcttatcagcaaactttccactgtgtgtcttagaccttggcac 180
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctcggtcccagatgcagct-atcagcaaactttccactgtgtgtcttagaccttggcac 379
Query: 181 ctctaagtcct 191
|||||||||||
Sbjct: 380 ctctaagtcct 390
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 590
Length adjustment: 8
Effective length of query: 183
Effective length of database: 582
Effective search space: 106506
Effective search space used: 106506
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
