XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTCG
AGAAGGTTGTTATTGCATTTTTCAAGTTTTTTTTTTAATCATCATTCTGA
TATGAATGTTTACATGCTAAGAAATTATTTTGTGGATTATTAAATTAAAA
AATACATCAATACTTAAAATATCAATGTGGTCATTAGAGATGAATAAGAT
ATTCATGGCTTTCACCATAACTTGGCAAGGAAAATCAACTTCTGCCAAAC
CTGATGACCTGCGTTTGATCCTTTGAAATCAAAGGATAAAAAGAAAGAAT
TGAATACTAATAGGTGTCCTATGACCTAAGTAAACTGTGAAACGGCTATA
TCTTCACACCTGCCTACTTACACATGAATAAATATGCAAAATAAATAAAA
GTATTTAAAATATTTTGATATTAAATTATTTTATATATGTTCCATACTAA
CAGTGGGACAAAAAAAAATGTTTGTTATTTCCTGTCATTTACTAATATGG
TTTTATGGCATATACTGAGAGAGTTTATAAGGTTGAGTGTGTCTTTGCCA
GTATCCCATTTTAATAAAACATGTATTTGTGAACCTTGTAATTGTAGACT
TAGGCAAATCATTCAATTTTCCTTTGGAGAGAGGTGTATCCGAAGAGAAA
TCCAACCACTTGCATTTAGGATTTTTTGCTCCGTTTTAAGCCTAAAGAAC
ATTTATTATTA

ATTTTTATATTACTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTGGATTCTCTA
AGAGTCTTTCTGACATTTCATAAGACAAGAAACTGTACTCAATCTGCTTA
TTCATTATTCTTCTCAAGTATGAAACGAGAAGTTGGAAGTCATTAGTTCA
GGTAGGTATTTTTGATGATTATTGGTCTTCTAGAATCATAGTTGCTTACA
TTCAGACCACTGAGAAACTAGAAAATTTCTGCTATTCTGAAGAATTCACA
TAACTGTCCTCGTCATTTAGGGATGATCTACTATGTGAGTCATTGCAGTC
TGCATTCCAAAGAGACATATGAATTATTACACCCCCCTCCACTTAGTTCA
TGGACCCAAATAATGAGTCAATGATTTTTAGCAAATCATTCTAAGAGCAA
TTCTATGGAATAAGATATAGATAGAAAATAGAATAATAATACTTTCCTTC
ACTTTTTGGAACATGGATTTGAAACAAAGAACTGGACCATTCCAAGAATA
AGAAGAGAATCAGAAAGATAAACACCAGTGCCTTTCACAGTTAAACTACA
CGTGGAAGTCCGTGTGTGTCTGTGCATCATTGTCCCCTGTCAGACATGCA
AAACTGCTGTACATTTCAACATTTCCTAATTTTATCACATGAATTATTTC
TAAGGAATGATGACTTCAGTGAAACAAAGCATAATAGAG

Query= MSMg01no189_n10.b1 MSMg01no189_n10.b1 CHROMAT_FILE:
MSMg01no189_n10.b1 PHD_FILE: MSMg01no189_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:55 2005
         (310 letters)



>mm_chr3_77641298_77642007
          Length = 710

 Score =  553 bits (286), Expect = e-162
 Identities = 298/302 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctcgagaaggttgttattgcatttttcaagttttttttttaatcatcattctga 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 506 gaattcctcgagaaggttgttattgcatttttcaagttttttttttaatcatcgttctga 447

                                                                       
Query: 65  tatgaatgtttacatgctaagaaattattttgtggattattaaattaaaaaatacatcaa 124
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tatgaatgtttaaatgctaagaaattattttgtggattattaaattaaaaaatacatcaa 387

                                                                       
Query: 125 tacttaaaatatcaatgtggtcattagagatgaataagatattcatggctttcaccataa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tacttaaaatatcaatgtggtcattagagatgaataagatattcatggctttcaccataa 327

                                                                       
Query: 185 cttggcaaggaaaatcaacttctgccaaacctgatgacctgcgtttgatcctttgaaatc 244
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 326 cttggcaaggaaaatcaacttctgccaaacctgatgacctgtgtttgatcctttgaaatc 267

                                                                       
Query: 245 aaaggataaaaagaaagaattgaatactaataggtgtcctatgacctaagtaaactgtga 304
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 266 aaaggataaaaagaaagaattgaatactaagaggtgtcctatgacctaagtaaactgtga 207

             
Query: 305 aa 306
           ||
Sbjct: 206 aa 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space:   211001
Effective search space used:   211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no189_n10.g1 MSMg01no189_n10.g1 CHROMAT_FILE:
MSMg01no189_n10.g1 PHD_FILE: MSMg01no189_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:05:55 2005
         (281 letters)



>mm_chr3_77571217_77571897
          Length = 681

 Score =  520 bits (269), Expect = e-152
 Identities = 278/281 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctggattctctaagagtctttctgacatttcataagacaagaaactgtactcaatctgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggattctctaagagtctttctgacatttcataagacaagaaactgtactcaatctgct 260

                                                                       
Query: 61  tattcattattcttctcaagtatgaaacgagaagttggaagtcattagttcaggtaggta 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tactcattattcttctcaagtatgaaacgagaagttggaagtcattagttcaggtaggta 320

                                                                       
Query: 121 tttttgatgattattggtcttctagaatcatagttgcttacattcagaccactgagaaac 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttgatgattattggtcttctagaatcatagttgcttacattcagaccactgagaaac 380

                                                                       
Query: 181 tagaaaatttctgctattctgaagaattcacataactgtcctcgtcatttagggatgatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagaaaatttctgctattctgaagaattcacataactgtcctcgtcatttagggatgatc 440

                                                    
Query: 241 tactatgtgagtcattgcagtctgcattccaaagagacata 281
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tactatgtgagtcattgcagtctgcattccaaagagacata 481


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space:   182784
Effective search space used:   182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)