Query= MSMg01no190_a14.b1 MSMg01no190_a14.b1 CHROMAT_FILE:
MSMg01no190_a14.b1 PHD_FILE: MSMg01no190_a14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:09 2005
(310 letters)
>mm_chr3_95535837_95536546
Length = 710
Score = 578 bits (299), Expect = e-169
Identities = 305/307 (99%), Gaps = 1/307 (0%)
Strand = Plus / Minus
Query: 5 gaattccacagatcagttaaagcttgatggtgggcgaagggaggtggaaggtgatagaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gaattccacagatcagttaaagcttgatggtgggcgaagggaggtggaaggtgatagaag 253
Query: 65 agcattggctgcagtaactccagttccaggtgatccaacactcactcacacagacacaca 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 252 agcattggctgcagtaactccagttccaggtgatccaacacccactcacacagacacaca 193
Query: 125 tgcaggcagaacaccaatagacataaaataaatctaaaaacaaaaaggcttcaggggctg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tgcaggcagaacaccaatagacataaaataaatctaaaaacaaaaaggcttcaggggctg 133
Query: 185 gagcgatggctgctcccaacatcc-acatggtggctcacaactctgtaaatgaagcaggg 243
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 132 gagcgatggctgctcccaacatccaacatggtggctcacaactctgtaaatgaagcaggg 73
Query: 244 atcggaagccctctcctggcctctgctagcaccagatacatacaggcctgcagacaagag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atcggaagccctctcctggcctctgctagcaccagatacatacaggcctgcagacaagag 13
Query: 304 ttaatct 310
|||||||
Sbjct: 12 ttaatct 6
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_a14.g1 MSMg01no190_a14.g1 CHROMAT_FILE:
MSMg01no190_a14.g1 PHD_FILE: MSMg01no190_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:09 2005
(277 letters)
>mm_chr3_95396624_95397300
Length = 677
Score = 534 bits (276), Expect = e-156
Identities = 276/276 (100%)
Strand = Plus / Plus
Query: 1 caggacagccaggactacgtagagagaccttgtcaaaacaaggagcagggggaacaatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggacagccaggactacgtagagagaccttgtcaaaacaaggagcagggggaacaatag 260
Query: 61 gtttttagtttttttgtttttcattttcttctgtggatcttgtaacaattttttaagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttttagtttttttgtttttcattttcttctgtggatcttgtaacaattttttaagttt 320
Query: 121 tttttttatttgtatgtacgtatctgtagagatggctcaaccattaagaacactggctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttttatttgtatgtacgtatctgtagagatggctcaaccattaagaacactggctgc 380
Query: 181 tcttccagagatcctgagttcaatttccagcagccagatggtggctcacaaccatttgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttccagagatcctgagttcaatttccagcagccagatggtggctcacaaccatttgta 440
Query: 241 atgtaatctgttaccctattctggtatgcagctata 276
||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtaatctgttaccctattctggtatgcagctata 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 677
Length adjustment: 9
Effective length of query: 268
Effective length of database: 668
Effective search space: 179024
Effective search space used: 179024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
