Query= MSMg01no190_h21.b1 MSMg01no190_h21.b1 CHROMAT_FILE:
MSMg01no190_h21.b1 PHD_FILE: MSMg01no190_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:45 2005
(312 letters)
>mm_chr3_118205502_118206214
Length = 713
Score = 582 bits (301), Expect = e-171
Identities = 307/309 (99%), Gaps = 1/309 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcgtttttgtgctgagaa-atcattgaccctgatttcagaattttgtttgatg 63
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcgtttttgtgctgagaacatcattgaccctgatttcagaattttgtttgatg 264
Query: 64 tagagtaacaggcaaaatcattatcttcattaaaccatggagagaaagatttcttgggta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tagagtaacaggcaaaatcattatcttcattaaaccatggagagaaagatttcttgggta 324
Query: 124 agcatggagaaataaaacaagagctgtggagatgcttctgcgtttaaagaacttgttact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcatggagaaataaaacaagagctgtggagatgcttctgcgtttaaagaacttgttact 384
Query: 184 tgtgcatcggtgtagaactcacacaaagactgggagcaggcaggaactgtaaatatccag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgtgcatcggtgtagaactcacacaaagactgggagcaggcaggaactgtaaatatccag 444
Query: 244 agctggctggctagcaagcctagccacatcagctagtttggcttttggctgagtgacatt 303
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agctggttggctagcaagcctagccacatcagctagtttggcttttggctgagtgacatt 504
Query: 304 gcctagtta 312
|||||||||
Sbjct: 505 gcctagtta 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 713
Length adjustment: 9
Effective length of query: 303
Effective length of database: 704
Effective search space: 213312
Effective search space used: 213312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_h21.g1 MSMg01no190_h21.g1 CHROMAT_FILE:
MSMg01no190_h21.g1 PHD_FILE: MSMg01no190_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:06:45 2005
(292 letters)
>mm_chr3_118310398_118311089
Length = 692
Score = 565 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Minus
Query: 1 ccctatatggtttatgcatgccatggctgaaaacaattctcacaggggttctttcaaccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ccctatatggtttatgcatgccatggctgaaaacaattctcacaggggttctttcaaccc 433
Query: 61 aggtcctagtgcacctgacaaatccaagatctttataaaagcctagattttataatttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aggtcctagtgcacctgacaaatccaagatctttataaaagcctagattttataatttct 373
Query: 121 tcaaaattaccctagcaagctcatcttttccacacattaaaatgaattctttttggaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tcaaaattaccctagcaagctcatcttttccacacattaaaatgaattctttttggaatt 313
Query: 181 ctataaaactctccataatgccaagacaagtgaatagacaaatttttactactaagtagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctataaaactctccataatgccaagacaagtgaatagacaaatttttactactaagtagg 253
Query: 241 tgctaacattgccctttctcttttgtactactcagttccttacatctatcta 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgctaacattgccctttctcttttgtactactcagttccttacatctatcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
