Query= MSMg01no190_n13.b1 MSMg01no190_n13.b1 CHROMAT_FILE:
MSMg01no190_n13.b1 PHD_FILE: MSMg01no190_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:15 2005
(314 letters)
>mm_chr3_67986760_67987474
Length = 715
Score = 557 bits (288), Expect = e-163
Identities = 303/308 (98%), Gaps = 1/308 (0%)
Strand = Plus / Minus
Query: 4 ggaattccctatcccacccccctcttgccctgctgagagtgtcacatcacaggagagaag 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggaattccctatcccatccccctcttgccctgctgagagtgtcacatcacaggagagaag 452
Query: 64 gtagcaagtctcttgggacaagaaaacaaaacccatcaggaaaaggtagagtgaatagag 123
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gtaacaagtctcttgggacaagaaaacaaaacccatcaggaaaaggtagagtgaatagag 392
Query: 124 actcatggtgggaaagaagcaagttgacaatctcagtagatcagtcagatacccagtctc 183
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 actcatggtgggagagaagcaagttgacaatctcagtagatcagtcagatacccagtctc 332
Query: 184 actgcaaaggtgagttgctccccgatggacactgaacaatcctgaccctgcctcctttct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 actgcaaaggtgagttgctccccgatggacactgaacaatcctgaccctgcctcctttct 272
Query: 244 tcacacaaaacaggcacgccttaaactctattccacaagtaattgttctatcccc-aaaa 302
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct: 271 tcacacaaaacaggcacgccttaaactctactccacaagtaattgttctatcccccaaaa 212
Query: 303 caattgta 310
||||||||
Sbjct: 211 caattgta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 715
Length adjustment: 9
Effective length of query: 305
Effective length of database: 706
Effective search space: 215330
Effective search space used: 215330
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_n13.g1 MSMg01no190_n13.g1 CHROMAT_FILE:
MSMg01no190_n13.g1 PHD_FILE: MSMg01no190_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:15 2005
(288 letters)
>mm_chr3_67898341_67899028
Length = 688
Score = 516 bits (267), Expect = e-151
Identities = 282/287 (98%), Gaps = 2/287 (0%)
Strand = Plus / Plus
Query: 1 atgattcctcctgtctgcaagtgaagtctgacccaggaggaaataaaaatggggtgtagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgattcctcctgtctgcaagtgaagtctgacccaggaggaaataaaaatggggtgtagg 260
Query: 61 taatgcccagcagacctgttgcccctcactatttagttcaccaagtgcttgtttcatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatgcccagcagacctgttgcccctcactatttagttcaccaagtgcttgtttcatctc 320
Query: 121 ccgcccacccttacgataaggaaatctcagcgtctgccctgtttcacatgggaccc-tct 179
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |
Sbjct: 321 ccgcccacccttacgataaggagatctcagcgtctgccctgtttcacatgggacccgt-t 379
Query: 180 ggtgttctactgacctatgaactagaaagacaagctatccattcctcatcccacactata 239
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 380 ggtgttctactgacctatgaactagaaaggcaagctatccattcctcatcccacactata 439
Query: 240 cgcttcatgaaacatgggaaaacatcgtggttgacattttctgccta 286
| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cacttcatgaaacatgggaaaacatcgtggttgacattttctgccta 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
