TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGTCTGCTTCCAAAAAACAGGAATCCTAGAGTCCAAAGAGCTTCAT
TGCCTTCTCCAAATCTCTTAAACCAGGAATCTTTTCCATTTATTTCAGAA
AATACTAACAGTTGGCCCTTTCATATGGGCATGTGTAAGTAAAGGTAAAT
GTAATTTTGGAAAATTTAGATTCTAAACCAAGCAATAGCTTGACCCCACC
GAATAATGTCCCTTTATGCTCCATCCCTGTGTTTCTGAGCAGTGTAGGTA
GGATAATAGCCATTCCTCACCCACAAATAAAAATGCAAATATTCAAGCTC
CTCTTATGATTATTTTCTCTCTTCACTAGGCTAAAATGAATCCTTTATTC
CTTATAAATCTTACACCAGAGTACAATATCATTTGTTTGTTTGTTTATTA
TATTATTTTTTTACTTATTCACTTTATATCCCTCCCACTGTCCGCACACC
CTGCCCAGGTCAGCTCCTATCACAGTACTTTCCCCCCACCCCCTCCCCTT
CTTCTCTGAGAGGGTGGAGGCCCCTGGATATCCTCCAACCCTAGCATTTC
AAGTCTCTTTGATGCTAGGTGCTTCCTCTCTCACTGAAGCCCGACAACAC
ATCTCAGCTATAAGAATATATTCCACATACAGGTAACAGTTTTGGTGGTA
ACCCCCACTTTTA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCATGACAACCAGGGCTAAACAGAG
AATCCCTGCCTCGAAAAAACAAAAAACAATAAACAAATAAAGAGAAAATG
AATGACACACAGGCATACAGAAGAGGACTGGTCCCAAAGACAGCTCTGTC
CTAAATATACTAGAGCACATTGCTTCACAAAATGAATTCTGAACATGCTC
TCACATAGTGCATTTGAATATACTTTCTAGGTTAACCCCATATGATCACA
AGAAACAAAAGGTAACAAGAAGATCAGAGTCAGAAGTATATCTCAGACTC
ATGTCAAAGATTGTCTGGCCACGCCACCATGCTTCGGTTTTCAAAGTTCC
AGAGAGTGGTTCTCCACCTTTTTAATACTGCGGTTCCTTCATATATATAC
TTCCTTATGCTGTGTGGTGCCCCAACCGTAAAACTATTTTTTGCTGCTTC
ATAACTGAAATGTCCTACTGATATGAATTGTAACATACATTTCTGACATA
CAGATAGTCTTAGACAACTCCTGTGAAATTTGTCACAAGGACTAGCAACC
TACAGGTTGCCAACCACAGTGCCAGCAACTAGGAAAACTAGCCAGCCCCT
TGATTTTTACAATGTTGCCTTCCGTAACTGTGGTAGAATAGATGTGCTCT
ATTTTAGTGGTCTAAGCAT

Query= MSMg01no191_n12.b1 MSMg01no191_n12.b1 CHROMAT_FILE:
MSMg01no191_n12.b1 PHD_FILE: MSMg01no191_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:36 2005
         (635 letters)



>mm_chr3_25431952_25432986
          Length = 1035

 Score = 1062 bits (549), Expect = 0.0
 Identities = 597/613 (97%), Gaps = 4/613 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgtctgcttcca-aaaaacaggaatcctagagtccaaagagcttcattgccttc 63
           |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 611 gaattctgtctgcttccacaaaaacaggaatcctagagtccaaagagcttcattgcctcc 552

                                                                       
Query: 64  tccaaatctcttaaaccaggaatcttttccatttatttcagaaaatactaacagttggcc 123
           |||||||||||||||||||||||||  |||||||||||||| ||||||||||||||||||
Sbjct: 551 tccaaatctcttaaaccaggaatctcctccatttatttcagcaaatactaacagttggcc 492

                                                                       
Query: 124 ctttcatatgggcatgtgtaagtaaaggtaaatgtaattttggaaaatttagattctaaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 491 ctttcatatgggcatgtgtaagtaaaggtaaatgtaattttggaaaatttagattcttaa 432

                                                                       
Query: 184 ccaagcaatagcttgaccccaccgaataatgtccctttatgctccatccctgtgtttctg 243
           ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 431 ccaagcaatagtttgaccccaccgaataatatccctttatgctccatccctgtgtttccg 372

                                                                       
Query: 244 agcagtgtaggtaggataatagccattcctcacccacaaataaaaatgcaaatattcaag 303
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 371 agcagtgtaggtaggataatagctattcctcacccacaaataaaaatgcaaatattcaag 312

                                                                       
Query: 304 ctcctcttatgattattttctctcttcactaggctaaaatgaatcctttattccttataa 363
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttcctcttatgattattttct-tcttcactaggctaaaatgaatcctttattccttataa 253

                                                                       
Query: 364 atcttacaccagagtacaatatcatttgtttgtttgtttattatattatttttttactta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atcttacaccagagtacaatatcatttgtttgtttgtttattatattatttttttactta 193

                                                                       
Query: 424 ttcactttatatccctcccactgtccgcacaccctgcccaggtcagctcctatcacagta 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 ttcactttatatccctcccactgtccgcacaccctgcccaggtcagctcctatcacagta 133

                                                                       
Query: 484 ctttccccccaccccctccccttcttctctgagagggtggaggcccc-tggatatcctcc 542
           ||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 132 ctttccccc-accccctccccttcttctctgagagggtggaggccccctgggtatcctcc 74

                                                                       
Query: 543 aaccctagcatttcaagtctctttgatgctaggtgcttcctctctcactgaagcccgaca 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 73  aaccctagcatttcaagtctctttgatgctaggtgcttcctctctcactgaagcctgaca 14

                        
Query: 603 acacatctcagct 615
           |||||||||||||
Sbjct: 13  acacatctcagct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1035
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1025
Effective search space:   640625
Effective search space used:   640625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)