Query= MSMg01no192_c07.b1 MSMg01no192_c07.b1 CHROMAT_FILE:
MSMg01no192_c07.b1 PHD_FILE: MSMg01no192_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:07 2005
(417 letters)
>mm_chr3_118791497_118792314
Length = 818
Score = 656 bits (339), Expect = 0.0
Identities = 378/391 (96%), Gaps = 1/391 (0%)
Strand = Plus / Minus
Query: 5 gaattctcacctgcaatttgacatattcagaaggagccattatggaaagactgctagact 64
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 391 gaattctcacgtgcaatttgacatattcagagggagccattatggaaagactgctagact 332
Query: 65 tcttgatctgttccacatacttttttcaaaatagtttactgcatatgggttttaaggaag 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 331 tcttgatctgttccacatacttttttcaaaatagtttactggatatgggttttaaggaag 272
Query: 125 aatgaac-atttggaagtacttaaaggagctgcatttaaaagaaggcctattttacccac 183
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aatgaactttttggaagcacttaaaggagctgcatttaaaagaaggcctattttacccac 212
Query: 184 attttagagggtgttagtactcacagattaagcagctgacaaaacaggaacgttagttac 243
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 211 attttagagggtgttagtactcacagattaagcagctgacaaaacaggaatgttagttac 152
Query: 244 ccaggattggcgcatcaataaaggaaatatatacctgttttctacccgaaggttgaaagt 303
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 tcaggattggcgcctcaataaaggaaatatatacctgttttctacccgaaggttgaaagt 92
Query: 304 ctgtgtttattaatctcctggtgacctttgctatctatagggccagacttctcccaaatc 363
| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 91 ccatgtttattaatctcctggtgacctttcctatctgtagggccagacttctcccaaatc 32
Query: 364 ctcagattgtttatccccgactttttctccc 394
|||||||||||||||||||||||||||||||
Sbjct: 31 ctcagattgtttatccccgactttttctccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 818
Length adjustment: 9
Effective length of query: 408
Effective length of database: 809
Effective search space: 330072
Effective search space used: 330072
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_c07.g1 MSMg01no192_c07.g1 CHROMAT_FILE:
MSMg01no192_c07.g1 PHD_FILE: MSMg01no192_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:09:08 2005
(381 letters)
>mm_chr3_118697833_118698613
Length = 781
Score = 642 bits (332), Expect = 0.0
Identities = 371/388 (95%), Gaps = 7/388 (1%)
Strand = Plus / Plus
Query: 1 agactcttcatggatcatctgtgctcccacagcctctaataccctgtccctctggtgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 agactcttcatggatcatctgtgctcccacagcctctaataccctgtccctctggtgatc 253
Query: 61 ctacctgaagctcatttctcctaagcaagatctacttcctgaaagaagttctcctcgttg 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 254 ctacctgaagctcatttctcctgagcaagatctacttcctgaaagaagttctcctcggtg 313
Query: 121 ggtatctcagtgggcattcctggcatgtataacaggcttcactctatgctgtgaccaaga 180
|||||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 314 ggtatctcagtgggcactcccggcatgtataacaggcttcactctatactgtgaccaaga 373
Query: 181 cattacttc-------catggtttcatacagtggtcttttgagtaattcttgcaagaaat 233
| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 374 ctttacttccatggttcatggtttcatacagtggtcttttgagcaattcttgcaagaaat 433
Query: 234 ctgaacctgccacacattccctggttgcactggcttgctcaaattcctctccaagcttga 293
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 434 ctgaatctgccacacattccctggttgcactggcttgctcaaattcctctccaagtttga 493
Query: 294 tctgcttggaagaaatgcctcttaattccacaaactaaactggactgactgcacatactg 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tctgcttggaagaaatgcctcttaattccacaaactaaactggactgactgcacatactg 553
Query: 354 agcctaactacatgaactcaactgaact 381
||||||||||| ||||||||||||||||
Sbjct: 554 agcctaactacgtgaactcaactgaact 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
