Query= MSMg01no193_c19.b1 MSMg01no193_c19.b1 CHROMAT_FILE:
MSMg01no193_c19.b1 PHD_FILE: MSMg01no193_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:27 2005
(410 letters)
>mm_chr3_124824742_124825551
Length = 810
Score = 688 bits (356), Expect = 0.0
Identities = 392/404 (97%)
Strand = Plus / Plus
Query: 7 attctcagtagaagaatctcaaattgctgagaagcacttaaagagaagtttaacatcctt 66
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attctcaatagaagaatctcaaattgctgagaagcacttaaagagaagtttaacatcctt 266
Query: 67 agtcaccagggaaatgataatagccacagtgtttagagctgggtttccttaggatgcttt 126
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 267 agtcaccagggaaatgataatagccacagtgtttagagctgggtttccttgggatgcttt 326
Query: 127 tatattacatcatgcacttccatatgcacccacccactcacttcttgcttgcagcccctc 186
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 327 tatattacatcatgcacttccatatacacccacccactcacttcgtgcttgcagcccctc 386
Query: 187 tcctatatatcattctgtgtacgcagtaaaacaatcctctgtcatagtatttaatgtaag 246
||||| |||||||||| ||||||||||||||||||| |||||| ||||||||| ||| ||
Sbjct: 387 tcctacatatcattctttgtacgcagtaaaacaatcatctgtcttagtatttactgtgag 446
Query: 247 aactgaccattcctttcacaaaatactttactatggcaggttaggtcacttggtaactat 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aactgaccattcctttcacaaaatactttactatggcaggttaggtcacttggtaactat 506
Query: 307 gtcatacacagcagagatgctttggacatttaagtccttactctctacataccacactgc 366
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gccatacacagcagagatgctttggacatttaagtccttactctctacataccacactgc 566
Query: 367 atgaacaaagagctgtttgaaaattcaactttatttcttactgt 410
||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 567 atgaacaaacagctgtttgaaaattcaactttatttcttactgt 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 410
Length of database: 810
Length adjustment: 9
Effective length of query: 401
Effective length of database: 801
Effective search space: 321201
Effective search space used: 321201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_c19.g1 MSMg01no193_c19.g1 CHROMAT_FILE:
MSMg01no193_c19.g1 PHD_FILE: MSMg01no193_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:11:27 2005
(215 letters)
>mm_chr3_124952210_124952824
Length = 615
Score = 342 bits (177), Expect = 7e-99
Identities = 206/216 (95%), Gaps = 2/216 (0%)
Strand = Plus / Minus
Query: 1 aatagaggaatctaaagaattcatacatgaaagagaactgtttttgttttggcccttttc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 507 aatagaggaatctaaagaattcatacatgaaagagaactgtttttgttttggggtttttc 448
Query: 61 tttttggtttttgttttgttttgttttgttttttaattgttgttgctcttgtgttttgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 tttttggtttttgttttgttttgttttgttttttaattgttgttgctcttgtgttttgag 388
Query: 121 gcagttaaaaaaacaaacaaatgagcaaatcagggatcataaacaatgaagtgaaatttg 180
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 387 gctgttaaaaaaacaaacaaatgagcagatcagggatcataaacaatgaagtgaaatttg 328
Query: 181 aata-atggagtatttacatagnaatgggaagggaa 215
| | ||||| ||||||||||| |||||||||||||
Sbjct: 327 -agacatggaatatttacatagtaatgggaagggaa 293
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 215
Length of database: 615
Length adjustment: 9
Effective length of query: 206
Effective length of database: 606
Effective search space: 124836
Effective search space used: 124836
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
