Query= MSMg01no193_m07.b1 MSMg01no193_m07.b1 CHROMAT_FILE:
MSMg01no193_m07.b1 PHD_FILE: MSMg01no193_m07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:23 2005
(393 letters)
>mm_chr3_46896710_46897504
Length = 795
Score = 731 bits (378), Expect = 0.0
Identities = 388/392 (98%), Gaps = 2/392 (0%)
Strand = Plus / Plus
Query: 1 tagaacagactcacaaagatcctactgtctcttccatatgaatgctaggattaaaggtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tagaacagactcacaaagatcctactgtctcttccatatgaatgctaggattaaaggtat 260
Query: 61 gtgttatcatcactttactgtagcaaggttattagcaagtccaattcatgtgaatgcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgttatcatcactttactgtagcaaggttattagcaagtccaattcatgtgaatgcagt 320
Query: 121 tacccaatttacagaaaaaaaa--gagtattctagcattcaaaacagactttactttaaa 178
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacccaatttacagaaaaaaaaaagagtattctagcattcaaaacagactttactttaaa 380
Query: 179 aatcaactgagaaatgagaaagatacttttagttttaaatttttaaagttaaagaaagtc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatcaactgagaaatgagaaagatacttttagttttaaatttttaaagttaaagaaagtc 440
Query: 239 tgtcatcattaaggcagaaatactaacttaaccttaagtttccaaagatttactttgtcc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtcatcattaaggcagaaatactaacttaaccttaagtttccaaagatttactttgtcc 500
Query: 299 atctcttatattttggaaatttgctaggaattatagtaataaatgtcttaagctataaca 358
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 atctcttatattttggaaatttgctaggaattatagtaataaatgccttaagctataaca 560
Query: 359 aaagtataaagatttcaaggaaaattgtgtgt 390
||||||||||||||||||||| ||||||||||
Sbjct: 561 aaagtataaagatttcaaggacaattgtgtgt 592
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 795
Length adjustment: 9
Effective length of query: 384
Effective length of database: 786
Effective search space: 301824
Effective search space used: 301824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no193_m07.g1 MSMg01no193_m07.g1 CHROMAT_FILE:
MSMg01no193_m07.g1 PHD_FILE: MSMg01no193_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:12:23 2005
(382 letters)
>mm_chr3_46935687_46936468
Length = 782
Score = 702 bits (363), Expect = 0.0
Identities = 375/379 (98%)
Strand = Plus / Minus
Query: 1 attacaactgctatgaaatcaatgtggaaattaaagagcatccaaattcaaagaaacaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 attacaactgctatgaaatcaatgtggaaattaaagagcatccaaattcaaagaaacaaa 520
Query: 61 ataggacctcacaagctaaaggtttaaatacaattgcagtaaaaggatgcttatgggtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ataggacctcacaagctaaaggtttaaatacaattgcagtaaaaggatgcttatgggtac 460
Query: 121 cagagcttagctctctacaaatgaattttcaaaaattattggcagtgcactggggttcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 cagagcttagctctctacaaatgaattttcaaaaattattggcagtgcactggggttcac 400
Query: 181 acgtacaataacacaccttgtccacatacacagatgaactcatgatctcaccaacacaca 240
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atgtacaatagcacaccttgtccacatacacagatgaactcatgatctcaccaacacaca 340
Query: 241 cagttttaactacattatttcaagaacgacaacacaacaacaaatagagatatttgcttg 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 339 cagttttaactacattatttcaagaaagacaacacaacaacaaatagagatatttgcttg 280
Query: 301 ataaaaatttcatggatactgaagtgacaaaaagtaaacatatatacaacaatggagaga 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 279 ataaaaatttcatggatactgaagtgacaaaaagtaaacatatatactacaatggagaga 220
Query: 361 caaggaaatataaacatga 379
|||||||||||||||||||
Sbjct: 219 caaggaaatataaacatga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
