Query= MSMg01no194_e01.b1 MSMg01no194_e01.b1 CHROMAT_FILE:
MSMg01no194_e01.b1 PHD_FILE: MSMg01no194_e01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:04 2005
(318 letters)
>mm_chr3_14132334_14133051
Length = 718
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%)
Strand = Plus / Minus
Query: 5 gaattcatttacccactaccacaaaagtttatgatacttcggtctaactctcagtttacc 64
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 487 gaattcatttacccactaagacaaaagtttatgatacttcagtctaactctcagtttacc 428
Query: 65 actgtaaccacccaggcaaagctattgctcaagcattaggcatgcttttcagaataaatc 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 427 actgtaaccacccaggcaaagctactgctcaagcattaggcatgcttttcagaataaatc 368
Query: 125 tagatggaataatttccacggtatttttgcatcagtctgtgattaattttaatgtgaatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tagatggaataatttccacggtatttttgcatcagtctgtgattaattttaatgtgaatg 308
Query: 185 cattctgcccattgtgtgctacatgatctctcatttcttattacagttacccttcctggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cattctgcccattgtgtgctacatgatctctcatttcttattacagttacccttcctggt 248
Query: 245 tatataatatcatgatgtaagccagccatatagccgtataatttgtgtgtttgtgtgtat 304
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tatatgatatcatgatgtaagccagccatatagccgtataatttgtgtgtttgtgtgtat 188
Query: 305 gtgtgtgtgtgt 316
||||||||||||
Sbjct: 187 gtgtgtgtgtgt 176
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_e01.g1 MSMg01no194_e01.g1 CHROMAT_FILE:
MSMg01no194_e01.g1 PHD_FILE: MSMg01no194_e01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:04 2005
(421 letters)
>mm_chr3_14081345_14082169
Length = 825
Score = 733 bits (379), Expect = 0.0
Identities = 413/425 (97%), Gaps = 4/425 (0%)
Strand = Plus / Plus
Query: 1 ttgaagtc-cagatttgccattcctagtcttcatacctatttttcattttccttcaa-ta 58
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ttgaagtcacagatttgccattcctagtcttcatacctatttttcattttccttcaaata 260
Query: 59 gattttactcagtattttccttccccttctgacattctctatatattcttcataacccct 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gattttactcagtattttccttccccttctgacattctctatatattcttcataacccct 320
Query: 119 atatactgtgctttcttttctttactgtactttattcctctgaatctctcacactcatag 178
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 atatactgtgctttcttttctttactgtactttattcctctaaatctctcacactcatag 380
Query: 179 cttctgtgactaacagaagacctaagttagataaagagaaggtagttctcgcctctggtg 238
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 381 cttctgtgactaacagaagacctaagttagataaagcgaaggtaattctcgcctctggtg 440
Query: 239 aggtattgta--agtgatgctgcctgtcccaataataatataatgttggtagtcagaacc 296
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 aggtattgtgttagtgatgctgcctgtcccaataataatataatgttggtagtcagaagc 500
Query: 297 atataatattcctaggctgttagaattaagaataagccatattgcatcttttctggtgtg 356
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 atataatattcctaggctgttagaattaagaataagccatattgtatcttttctggtgtg 560
Query: 357 ttaaataattactggctaatatatgcaaatattctatgaaggagcttaatatgttcagca 416
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 ttaaataattactggctaacatatgcaaatattctatgaatgagcttaatatgttcagca 620
Query: 417 ttatg 421
|||||
Sbjct: 621 ttatg 625
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 825
Length adjustment: 9
Effective length of query: 412
Effective length of database: 816
Effective search space: 336192
Effective search space used: 336192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
