Query= MSMg01no194_h17.b1 MSMg01no194_h17.b1 CHROMAT_FILE:
MSMg01no194_h17.b1 PHD_FILE: MSMg01no194_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:21 2005
(589 letters)
>mm_chr3_137862296_137863283
Length = 988
Score = 787 bits (407), Expect = 0.0
Identities = 446/459 (97%), Gaps = 1/459 (0%)
Strand = Plus / Minus
Query: 131 agaaagctgtttccctaccaggaacaccatgccttaaactaagactgtttatccgtttat 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 agaaagctgtttccctaccaggaacaccatgccttaaactaagactgtttatccgtttat 729
Query: 191 gtagtttcatcccatgtcgcaaagcttgcggaaccctccgcatggccagagttcggggtt 250
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 728 gtagtttcatcccatgtcgcaaagcttgcggaaccctctgcatggccagagttcggggtt 669
Query: 251 acctactgtcctgctttcagcaagtaatatggcttacaaccagaagctacctcatctttc 310
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 668 acctactgtcctgctttcagcaagtaatatggcttccaaccagaagctacctcatctttc 609
Query: 311 tcctccccttccaggcacaatgatgtagcgcacctcactttttcttcaggggaaatggtc 370
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 608 tcctccccttccaggcacaatgatgtagctcacctcactttttcttcaggggaaatggtc 549
Query: 371 tcccagacagcgtcctagagcagccccttcatgtcattccacgagaacggggcaacccat 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tcccagacagcgtcctagagcagccccttcatgtcattccacgagaacggggcaacccat 489
Query: 431 acagctctgggcttccactcactgtgaggcatccgccccctgctcagcagccaacatccg 490
||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||
Sbjct: 488 acagctctgggcttccacttgctgtgaggcatctgccccctgctcagcagccaacaccca 429
Query: 491 tgtgcagttacggagagcagagaggattggcagaaaaatgcctgctggtgggcagtctca 550
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 428 cgtgcagttacggagagcagagaggattggcag-aaaatgcctgctggtgggcagtctca 370
Query: 551 ctgtgtacagggccaaactccgtatgcagttctttcaga 589
||||||||||| ||| ||||| |||||||||||||||||
Sbjct: 369 ctgtgtacaggaccacactccatatgcagttctttcaga 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 988
Length adjustment: 10
Effective length of query: 579
Effective length of database: 978
Effective search space: 566262
Effective search space used: 566262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_h17.g1 MSMg01no194_h17.g1 CHROMAT_FILE:
MSMg01no194_h17.g1 PHD_FILE: MSMg01no194_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:21 2005
(289 letters)
>mm_chr3_137757770_137758458
Length = 689
Score = 559 bits (289), Expect = e-164
Identities = 289/289 (100%)
Strand = Plus / Plus
Query: 1 cattgaaccagaaatatcaatagctagaccaccctggatctccatattggcctttagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cattgaaccagaaatatcaatagctagaccaccctggatctccatattggcctttagtcc 260
Query: 61 agattgcagctgaatatcctagaagcaaaaagtacagtataagcagttagttaacacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agattgcagctgaatatcctagaagcaaaaagtacagtataagcagttagttaacacatc 320
Query: 121 tttcagagacacacttggcttcctgatctacagtcctctgctggaggactttgaaaatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttcagagacacacttggcttcctgatctacagtcctctgctggaggactttgaaaatca 380
Query: 181 atgcccatcaattcctttgtttccatgcaagcccaggacctctcacctactaactagtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcccatcaattcctttgtttccatgcaagcccaggacctctcacctactaactagtgt 440
Query: 241 tctaccatcacactataccccgcagtgaagaaggcttagaaatacagta 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctaccatcacactataccccgcagtgaagaaggcttagaaatacagta 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
