Query= MSMg01no197_b02.b1 MSMg01no197_b02.b1 CHROMAT_FILE:
MSMg01no197_b02.b1 PHD_FILE: MSMg01no197_b02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:49 2005
(316 letters)
>mm_chr3_34809548_34810263
Length = 716
Score = 588 bits (304), Expect = e-172
Identities = 310/312 (99%)
Strand = Plus / Minus
Query: 5 gaattctcaactcctcctgcaccatgcctgcctaggtgctgccatgctcccaccttgatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaattctcaactcctcctgcaccatgcctgcctaggtgctgccatgctcccaccttgatg 621
Query: 65 ataatgaactgaccctgtaagccagccccaattaaatgttgtcctttataagacttgcct 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ataatgaactgaacctgtaagccagccccaattaaatgttgtcctttataagacttgcct 561
Query: 125 tggtcatggtgtctgtccacagcagtaagaccctaagtaggatatatgagaactccaggg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tggtcatggtgtctgtccacagcagtaagaccctaagtaggatatatgagaactccaggg 501
Query: 185 tgacaacacagccatattaataaacaaaactgaataaacaaatgggcagaagaaatacct 244
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 500 tgacaacacagccatattaataaacaaaactgaataaacaaatgagcagaagaaatacct 441
Query: 245 gcacttcccataccagagaaaaaaatcctcaatggtttatgtaaatactcccccgactca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gcacttcccataccagagaaaaaaatcctcaatggtttatgtaaatactcccccgactca 381
Query: 305 gagctacctccc 316
||||||||||||
Sbjct: 380 gagctacctccc 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no197_b02.g1 MSMg01no197_b02.g1 CHROMAT_FILE:
MSMg01no197_b02.g1 PHD_FILE: MSMg01no197_b02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:16:49 2005
(434 letters)
>mm_chr3_34705466_34706299
Length = 834
Score = 741 bits (383), Expect = 0.0
Identities = 422/435 (97%), Gaps = 3/435 (0%)
Strand = Plus / Plus
Query: 1 aagatggggttcagtgagcagcctccttagcgcacctctgttcaacagctgaacatacag 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 aagatggggttcagtgagcagcctccttagcgcacctctgttcgacagctgaacatacag 260
Query: 61 tcccagcttctcctgctgggtccatgtccttgctggtttggggagagctgcaggaactga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcccagcttctcctgctgggtccatgtccttgctggtttggggagagctgcaggaactga 320
Query: 121 atgcctgtcacagcccc-gactatgtgtgtctggttgaggtctctgcagtgcttagaatg 179
| ||||||||||||||| | ||| ||||||||||||||| ||||||||||||| ||||||
Sbjct: 321 aagcctgtcacagccccag-ctacgtgtgtctggttgagatctctgcagtgctcagaatg 379
Query: 180 cccatctcactgggcggtggtagtgcacgcctttattcccagcacttgggaggcagaggc 239
|||||||| | |||| ||||| | |||||||||||||||||||||| |||||||||||||
Sbjct: 380 cccatctcgccgggc-gtggtggcgcacgcctttattcccagcactcgggaggcagaggc 438
Query: 240 aggcggatttctgagttcgaggccagcctggtctacaaagtgagttccaggaccaccagg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aggcggatttctgagttcgaggccagcctggtctacaaagtgagttccaggaccaccagg 498
Query: 300 tccaccagagaaaccctgtctcgaaaaaggaaatgacggaccatggttagctgtagctcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tccaccagagaaaccctgtctcgaaaaaggaaatgacggaccatggttagctgtagctcc 558
Query: 360 cgttatggacatgtcaggtgctatgtgttgccgcatcacaggtgactttatctcacattc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cgttatggacatgtcaggtgctatgtgttgccgcatcacaggtgactttatctcacattc 618
Query: 420 gcccacccctgctct 434
|||||||||||||||
Sbjct: 619 gcccacccctgctct 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
