Query= MSMg01no197_n10.b1 MSMg01no197_n10.b1 CHROMAT_FILE:
MSMg01no197_n10.b1 PHD_FILE: MSMg01no197_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:51 2005
(264 letters)
>mm_chr3_137235984_137236646
Length = 663
Score = 441 bits (228), Expect = e-128
Identities = 255/264 (96%), Gaps = 1/264 (0%)
Strand = Plus / Minus
Query: 1 ccttgtgattggcattaagtaaattcggatgaggtacacagagtctagagtagaagtaga 60
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 463 ccttgtgattgtcattaagtaaattcggatgaggtacacagagtctagtgtagaagtaga 404
Query: 61 aggaaggcagtacttatgacagaacaatgtgaggatgcattgtaggtgagagtgaggggt 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 403 aggaaggcagtacttatgacagaacaatgtgaggatgcattgtaggtgggagtgaggggt 344
Query: 121 gaccaaggggagggaccattgtgtaggaaaaactctcaagaggtaagagtggacaataaa 180
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 343 gaccaaggggagggaccatcgtgtaggaaaaactctcaaaaggtaagagtggacaataa- 285
Query: 181 ccaaagggataattgtgtcacatatttttaggtagactttacactatttctttaattccc 240
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 284 ccaaagggataattgtgtcaaatgtttttaggtagactttacactatttctttaattccc 225
Query: 241 aatgagaggcatgtttcctgagga 264
|||||||||||||||||| |||||
Sbjct: 224 aatgagaggcatgtttcccgagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 663
Length adjustment: 9
Effective length of query: 255
Effective length of database: 654
Effective search space: 166770
Effective search space used: 166770
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no197_n10.g1 MSMg01no197_n10.g1 CHROMAT_FILE:
MSMg01no197_n10.g1 PHD_FILE: MSMg01no197_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:52 2005
(221 letters)
>mm_chr3_137080464_137081084
Length = 621
Score = 397 bits (205), Expect = e-115
Identities = 214/217 (98%)
Strand = Plus / Plus
Query: 1 ttatttttgtttcagtaaaaccatttcattgaatgatatcccacagaaagaactgactcg 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 ttatttttgtttcagtaaaaccatttcattgaatgatatatcacagaaagaactgactcg 260
Query: 61 ttgattaatgccatttttattttgaaatactaataatgtcacacaaaatccatcttaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgattaatgccatttttattttgaaatactaataatgtcacacaaaatccatcttaaag 320
Query: 121 tgtgcttaaccattgactctttctttttcttgtttcttttttccttgtttaaaagttggt 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 tgtgcttaaccattgactctttctttgtcttgtttcttttttccttgtttaaaagttggt 380
Query: 181 tattttatttattaacatttcaaatgttatctccctt 217
|||||||||||||||||||||||||||||||||||||
Sbjct: 381 tattttatttattaacatttcaaatgttatctccctt 417
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
