Query= MSMg01no198_g10.b1 MSMg01no198_g10.b1 CHROMAT_FILE:
MSMg01no198_g10.b1 PHD_FILE: MSMg01no198_g10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:37 2005
(475 letters)
>mm_chr3_35292323_35293197
Length = 875
Score = 804 bits (416), Expect = 0.0
Identities = 458/472 (97%)
Strand = Plus / Plus
Query: 4 ggaattccacctttttctgaccagtgccctgcacatccttggctctttgttcagaaaagt 63
||||| ||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaataccagctttttttgaccagtgccctgcacatccttggctctttgttcagaaaagt 263
Query: 64 ccctctagaaaatgtagacgtcgcttccaatgccacatttctaacttgtgttgtgcttag 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccctctagaaaatgtagatgtcgcttccaatgccacatttctaacttgtgttgtgcttag 323
Query: 124 gttttggttatcaataccaagggggaaattgtgtggaggaggcattttcctctcaacatc 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 324 gttttggttatcaataccaagggggaaattgtgtggaggaggcgttttcctctcaacatc 383
Query: 184 taagaacactattttgtttcttcagttggccagttgactgattccaaaccaccatgtccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 taagaacactattttgtttcttcagttggccagttgactgattccaaaccaccatgtccc 443
Query: 244 cattttattatacacaagactctggccaaagcctccaggagagattctttgccaaggtaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cattttattatacacaagactctggccaaagcctccaggagagattctttgccaaggtaa 503
Query: 304 gaaaagaatttttactgttcaagaaatgctcaagagctctagctgcatatgcatcaaaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 504 gaaaagaatttttactgttcaagaaatgctcaagagctctagctgcatatgtatcaaaag 563
Query: 364 atggcctagtcggccatcactgcaaagagaggcccattggacacgcaaactttatatgcc 423
||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||
Sbjct: 564 atggcctagtcggccatcagtggaaagagaggcccattggacttgcaaactttatatgcc 623
Query: 424 ccagtacaggggaataccagggccaaaacgtgggagtgggtgggtaggggag 475
|||||||||||||| |||||||||||| | |||||||||||||||||||||
Sbjct: 624 ccagtacaggggaacgccagggccaaaaagggggagtgggtgggtaggggag 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no198_g10.g1 MSMg01no198_g10.g1 CHROMAT_FILE:
MSMg01no198_g10.g1 PHD_FILE: MSMg01no198_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:18:37 2005
(288 letters)
>mm_chr3_35324215_35324903
Length = 689
Score = 507 bits (262), Expect = e-148
Identities = 283/290 (97%), Gaps = 3/290 (1%)
Strand = Plus / Minus
Query: 1 acaggccacgaagctcaagaagaaggaagaccaaagtgtgggtggttcctgatttacaaa 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 568 acaggccacgaagctcaagaagaaggaagaccaaagtgtgggtggttcctgattgacaaa 509
Query: 61 gaccagaaaactaaacacgacttcatctcagattactcagtgttaggaaaaagatatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gaccagaaaactaaacacgacttcatctcagattactcagtgttaggaaaaagatatcaa 449
Query: 121 tata-caaagcatttttgaaaaacgaagacaatgaatataaatagtatcttagtaatgtt 179
|||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tatatgaaa-catttttgaaaaacgaagacaatgaatataaatagtatcttagtaatgtt 390
Query: 180 ataagtagtatcttgttaggtttttggattttgaaaatttcactagaggattggagatgt 239
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 389 ataagtagtatcttgttaggtttttggcttttgaaaatttcactagaggattggagatgt 330
Query: 240 aactcagcagct-aaaaaagcatatttctttttcaaagaatcccagatgg 288
|||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 329 aactcagcagctaaaaaaagcgtatttctttttcaaagaatcccagatgg 280
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 689
Length adjustment: 9
Effective length of query: 279
Effective length of database: 680
Effective search space: 189720
Effective search space used: 189720
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
