Query= MSMg01no199_l24.b1 MSMg01no199_l24.b1 CHROMAT_FILE:
MSMg01no199_l24.b1 PHD_FILE: MSMg01no199_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:25 2005
(555 letters)
>mm_chr3_25640481_25641434
Length = 954
Score = 551 bits (285), Expect = e-161
Identities = 306/313 (97%), Gaps = 2/313 (0%)
Strand = Plus / Minus
Query: 243 acaaattatattgttctcattatttcctttatggcatgtttctttattaaattctactga 302
|||||||||||||||||||||||||||||||||||| | || |||||||||||||||||
Sbjct: 954 acaaattatattgttctcattatttcctttatggca-ggctcattattaaattctactga 896
Query: 303 ttttattttgatgttgtaccctcctacatttataatttattttaaatttatttaatttat 362
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 895 ttttattttgatgttgtaccctcctatatttataatttattttaaatttatttaatttat 836
Query: 363 tgtaaaatcttttggcagtgtgtctgtatgttctcaacagagaatgatatatgcaaatag 422
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 tgtaaaatcttttggtagtgtgtctgtatgttctcaacagagaatgatatatgcaaatag 776
Query: 423 ggctcagatggtttcctccttagctgctactgctttttattatttcaaatcttgtatcac 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ggctcagatggtttcctccttagctgctactgctttttattatttcaaatcttgtatcac 716
Query: 483 aaaagtcagtttggagttgataatgttgttctgattatagagaaaataagtacagacttt 542
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 715 aaaagtcagtttggagttgataatgttgttctgattatagagaaaataagtacaga-ttt 657
Query: 543 tatagattagttg 555
|||||||||||||
Sbjct: 656 tatagattagttg 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 954
Length adjustment: 10
Effective length of query: 545
Effective length of database: 944
Effective search space: 514480
Effective search space used: 514480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no199_l24.g1 MSMg01no199_l24.g1 CHROMAT_FILE:
MSMg01no199_l24.g1 PHD_FILE: MSMg01no199_l24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:25 2005
(519 letters)
>mm_chr3_25559556_25560472
Length = 917
Score = 953 bits (493), Expect = 0.0
Identities = 512/519 (98%), Gaps = 2/519 (0%)
Strand = Plus / Plus
Query: 1 cttcctgtcctgtagaccttcatttacaaggccgttggttcagttgatggtatacttaat 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cttcctgtcctgtagaccttcatttacaaggccgttggttcagttgattgtatacttaat 260
Query: 61 tactacctagatgttaaatatcaacaaataccaccaggacgtgaaaggacaggtgagttt 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tactacctagatgttaaatatcaacaaataccaccaggacatgaaaggacaggtgagttt 320
Query: 121 tgcttaaaagtgatcctttttatgaaagtgggcacacaggctcctgtacgggggatgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgcttaaaagtgatcctttttatgaaagtgggcacacaggctcctgtacgggggatgatt 380
Query: 181 gttgtaatgcatactgatatggcaccaggtaataagagaacctcaattgtggtgtcagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttgtaatgcatactgatatggcaccaggtaataagagaacctcaattgtggtgtcagag 440
Query: 241 ggttttctagaggatgtgaagcaagtggttgactctcaacatctagacggaaccgagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggttttctagaggatgtgaagcaagtggttgactctcaacatctagacggaaccgagcag 500
Query: 301 gagaaaaagccagtatggtagagaagccacagaaggaatggcacagcctctgcttgggtt 360
||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||
Sbjct: 501 gagaaaaagccagtatggtagagaagccacagatggaatggcagagcctctgcttgggtt 560
Query: 361 gaaactgagcattttcggacagcattgtttggaagtgtgaacctctagcatgtaaccaaa 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 gaaactgagcattttcggacagcattgtttggaagtgtgaacctctatcatgtaaccaaa 620
Query: 421 ttatctttaagagtaagctcacacacaagaaaggtttagaacctttttttttggcaatgt 480
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 ttatctttaagagtaagctcacacacaagaaaggtttagaaccttttttt--ggcaatgt 678
Query: 481 cacatagctgttacatggatccatcagtgattttcaagg 519
|||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cacatagctgttacatggatccatcagtgattttcaagg 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 917
Length adjustment: 10
Effective length of query: 509
Effective length of database: 907
Effective search space: 461663
Effective search space used: 461663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
