Query= MSMg01no201_a17.b1 MSMg01no201_a17.b1 CHROMAT_FILE:
MSMg01no201_a17.b1 PHD_FILE: MSMg01no201_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:53 2005
(184 letters)
>mm_chr3_28446167_28446750
Length = 584
Score = 304 bits (157), Expect = 3e-87
Identities = 163/165 (98%)
Strand = Plus / Minus
Query: 16 gaattcatcattcaagtgctcgaagaccaagtactcttctgcattccaggatatttgcag 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaattcatcattcaagtgctcgaagaccaagtactcttctgcattccaggatatttgcag 274
Query: 76 actgaccaccaccccattgtgcacatgcatgtgcacatgcgtgcatgtacgtgcatacat 135
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 273 actgaccaccaccccattgtgtatatgcatgtgcacatgcgtgcatgtacgtgcatacat 214
Query: 136 gtgtgtatgtgtgtatgtgtgtacgtgtgtatgtgtgtatgtatg 180
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gtgtgtatgtgtgtatgtgtgtacgtgtgtatgtgtgtatgtatg 169
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no201_a17.g1 MSMg01no201_a17.g1 CHROMAT_FILE:
MSMg01no201_a17.g1 PHD_FILE: MSMg01no201_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:20:53 2005
(325 letters)
>mm_chr3_28422884_28423611
Length = 728
Score = 493 bits (255), Expect = e-144
Identities = 296/311 (95%), Gaps = 3/311 (0%)
Strand = Plus / Plus
Query: 1 tctcgggatctggaaaattatctcagaattgaccttcacaagtcactgaggttgtaaaat 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tctcgggatctggaaaattatctcagaattgaccttcagaagtcactgaggttgtaaaat 260
Query: 61 gacccggttggacttcatggttctctgccaagacctatgccctgtgccatgt---gaaga 117
|| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 261 gaagtggttggacttcatggttctctgccaagacctatgctctgtgccatgtgaagaaga 320
Query: 118 ctgaagtcagggctgactccatgcttctgtcatatctaggagaggtggagaataaagcac 177
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaaatcagggctgactccatgcttctgtcatatctaggagaggtggagaataaagcac 380
Query: 178 attcttagcaaaagttatgcacgtgtgtgtttgcatatgtgtgcatgtatgaatacatat 237
|||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 attcttggcaaaagttatacacgtgtgtgtttgcatatgtgtgcatgtgtgaatacatat 440
Query: 238 gtgtatacacatgtgcatatgtgtttgtatacatgcctgtgtatgtgtgcatgagagggg 297
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtatatgcatgtgcatatgtgtttgtatacatgcctgtgtatgtgtgcatgagagggg 500
Query: 298 agagagagaga 308
||||||||||
Sbjct: 501 ggagagagaga 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 728
Length adjustment: 9
Effective length of query: 316
Effective length of database: 719
Effective search space: 227204
Effective search space used: 227204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
